Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0704 ATGGGTATCAAGGATCTTCTCCGATTCGTGAAGCCTCATATCGAACCCACTCACATCAAGAAATACGCCGGAAAACGGGTTGGTATCGATGCTTATTCATGGCTACATAAGGGAGCTTATTCTTGTAGTATGGAGCTTTGTCTGAATTCAGATACTGAAAAGAAGTTCCGTTACATAGAGTACTTTATGCATCGAATCAAGCTGCTTCAGTACCATAAGATAACGCCAGTTGTTGTTTTTGATGGTGGCAACATTCCTTGCAAGGCAGCAACCGAGGAGGATAGGAAAAGGAAAAGAAGTGCTAATCGTGATTTGGCAATGGCTAAGCTCAAAGAAGGGAACGTCAATGCAGCCATAGAGCTATTCAAGAGAGCTGTGAACGTTACTCCCCTTATGGCTCATCAACTGATTCAGGTTCTGATATCAGAGAATGTTGAGTTTGTCGTAGCTCCATATGAAGCAGATGCTCAGTTAGCATACATGTCCAACCTTGAAGCAAAAAAAGGTGGAGTTGTAGCAGTGATCACAGAGGATAGTGATCTGATAGCATATGGTTGTCCAGCGGTTGTCTTTAAGATGGACCGTTACGGTAATGGAGAAAGCATGGAGTTAGAGAAGGTTTTTAAAGCTCAGACTTGTAAACCTTCCTTTCGGAATTTTGATATGGAACTCTTCACAGGTATGTGTGTCTTGGCTGGCTGTGATTTTCTCCCATCTGTTCCTGGAATTGGTATTGTGCGAGCTCATGCCCTGGTTTCCAAGTATCGGAAACTAGATCGTGTGTTATCTGTTCTTAAGTTAGAGAAGGGCAACCAAATGCCTGAAGATTACGCCAAATCCTTCAAAGAGGCAATTGCAGTCTTCCGGCATGCTCGAATATATGATGCCACTGATAAGGAGCTCAAACACATGACGCCACTTCCGCAAAAGCTTCTACAGTCCCTTGATGGACAACTTGATTTTTTGGGACCAGAAATTCCCCCAGCAATAGTAACTGCAATAGCTGAAGGCGAATTGAACCCCTCAACTAAGGAAGCCTTCGACAAACTTGAACGTTCTGGACTTCCATTAGATCCCATTGCCCTCCAGAGCAATGATCAACTCCAGAAGGTTGACGTTTCTGCAGCACTTACAAAGAACTCCTTTACAGTCTTTGGCTCCCATAATGCCAGAGAAAACAGTACAGTTACAAGGCAGAATCTGATCTCGAATAAAGACAACTACTCTGATGAAGCATTGGCACTTCAGAAACTAATTATGCCTTCGATAACTTGTAAAAGGGTAGGAAAAGAAAATATTCCAGATGAAACTCCAGTAAAGGTTCCTGACAACAACCCATTCAGGATAAAAAGACCTGAGGAGATTTCTTTGATTCAAAGAGAACACTCTGCTGAACAAATTCTCATTGTCAGCAATGAGGAATATATGGACTTACACATGAATCCAGATAACTTTCAAGAAGAGAGGTCTGAAATTCTCTCGAGCAAAAGGAAATTTCAGACCATTTGCTCAGATCAAGTAGAAACTTCGGATGACCAAGTTTCAGCCGTGACAGTGATTGATGTAGAAGATACAGATATTTCATGTTGGAATGTGGCATCCCAAGAAAGTGTAAATTCCAAGGATATGAAAGGCGCTGCTTTGAAAGGAAGAGGTGCAAATGAGAAGAAATCCAAGAAAAGCAATAGCAAGAAAACAGGGGATAAGTCTAAGAATTACACTATCTTGAATTTCTTTTCTCGAGTGTAA 1749 0.4168 MGIKDLLRFVKPHIEPTHIKKYAGKRVGIDAYSWLHKGAYSCSMELCLNSDTEKKFRYIEYFMHRIKLLQYHKITPVVVFDGGNIPCKAATEEDRKRKRSANRDLAMAKLKEGNVNAAIELFKRAVNVTPLMAHQLIQVLISENVEFVVAPYEADAQLAYMSNLEAKKGGVVAVITEDSDLIAYGCPAVVFKMDRYGNGESMELEKVFKAQTCKPSFRNFDMELFTGMCVLAGCDFLPSVPGIGIVRAHALVSKYRKLDRVLSVLKLEKGNQMPEDYAKSFKEAIAVFRHARIYDATDKELKHMTPLPQKLLQSLDGQLDFLGPEIPPAIVTAIAEGELNPSTKEAFDKLERSGLPLDPIALQSNDQLQKVDVSAALTKNSFTVFGSHNARENSTVTRQNLISNKDNYSDEALALQKLIMPSITCKRVGKENIPDETPVKVPDNNPFRIKRPEEISLIQREHSAEQILIVSNEEYMDLHMNPDNFQEERSEILSSKRKFQTICSDQVETSDDQVSAVTVIDVEDTDISCWNVASQESVNSKDMKGAALKGRGANEKKSKKSNSKKTGDKSKNYTILNFFSRV 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0704 582 Gene3D - 1 213 - -
Bisa02g0704 582 SMART xpgn3 1 102 IPR006085 GO:0004518
Bisa02g0704 582 MobiDBLite consensus disorder prediction 548 567 - -
Bisa02g0704 582 Pfam XPG N-terminal domain 1 100 IPR006085 GO:0004518
Bisa02g0704 582 CDD H3TH_FEN1-like 223 295 - -
Bisa02g0704 582 ProSiteProfiles TPR repeat profile. 99 132 IPR019734 GO:0005515
Bisa02g0704 582 SUPERFAMILY PIN domain-like 2 235 IPR029060 -
Bisa02g0704 582 ProSitePatterns XPG protein signature 2. 144 158 IPR019974 GO:0016788
Bisa02g0704 582 Pfam XPG I-region 144 235 IPR006086 GO:0004518
Bisa02g0704 582 Gene3D - 218 291 - -
Bisa02g0704 582 SMART xpgineu 141 213 IPR006086 GO:0004518
Bisa02g0704 582 MobiDBLite consensus disorder prediction 540 570 - -
Bisa02g0704 582 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 165 185 IPR006084 -
Bisa02g0704 582 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 225 240 IPR006084 -
Bisa02g0704 582 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 24 38 IPR006084 -
Bisa02g0704 582 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 76 95 IPR006084 -
Bisa02g0704 582 FunFam exonuclease 1 218 291 - -
Bisa02g0704 582 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 220 349 IPR036279 -
Bisa02g0704 582 SMART HhH_4 222 255 IPR008918 GO:0003677|GO:0003824
Bisa02g0704 582 FunFam Exonuclease 1, putative 1 214 - -
Bisa02g0704 582 CDD PIN_EXO1 1 209 IPR044752 GO:0046872
Bisa02g0704 582 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 557 IPR006084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0704 Bisa-ChrBisa02 11877667 11882321 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0704 1 315 Core DNA Replication Machinery Family AT5G26680 27.576 3.35e-16 79.3