Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0673 ATGCCTGCTGTCACAGAGGCCTCTGCAGTATCATCAGAACACTTAAAATATAGAAGGCCCAGGAACCAATTGAGCCATCTCATTTCCGAAACAGATCCGAACCCACAAATCCCTTCTCTTCTCCAATCTACTCGCTGCAAATCCACCATTTCCTCTCTCCTACTCTCTTCTTTCTCCAACAACACTTCCAGTGAAGCCACGCAGTCCAGCCTCAACGTCAACAAGAAGAAGAACAATTTCTCGGCGGCAACCTTCAGAGGATTCGGATGCACTGCCGGTGCGTCACAGCGGGTGTCAGTTCCCGCGGTGATTCGGACTTCGGCCGATTGGCAGGGAACGAGACCCAGAAAGAAGAAGCACAAAAGGAATGGTGCGAAGAACAATACGACCTCTCAAGGAGGCGTCGTTGATGGTCCTAATTCTGGTTCGGCTAACTCTGTTGATTTTCAAGATGTTTGGTGTGGTCCGGGAATTGGGTTTTCAGCGGATGTTGCTGCTCCGGTTGATTGCGTTATGGCGAGGAAGAATGTGTCTGCAAGAGGAAAGATTGATGCGGAGAAGATAGTCCACAGGGAGCGTCGGCGGACTGTAAATCCAGAAAGCATCCCGTTCTTGAACAGTGAAACTGAAATTTTCTCAAGTCGCTCTGAGTCTTTTGGAACTGCTAGATACTATCGTCATGTTCCACATCCTTCCTCTGATGGTTTTGCTGAGATGATGATGCTTCAAGGAAATCTGATAATGGGGGGAAGACTAAATTCTCACGACCATTTTAGAGACTGGAGACTTGATATTGATAACATGTCATATGAGCAACTGCTTGAGCTTGGTGAGAGAATTGGCTATGTGAACACTGGACTTAAAGAAGATGAGATGGGACGTTACATAAGGAGATTTAAGCTTTCAAAGTTAAATGACCCCCCAAAGCATCAACTTGACAAGAAGTGCAGCATTTGTCAGGAAGAATATGAAGCTGATGATGAGGTGGGGAGGCTAAGATGTGAACACAGCTATCACTTTCAGTGTTTAAGACAATGGCTTGCACAGAAAAATTGCTGCCCAGTGTGTAAGCAAGACGTCGTTGTTCGTCGCTCAGTGGCAAAATCTTAA 1110 0.4631 MPAVTEASAVSSEHLKYRRPRNQLSHLISETDPNPQIPSLLQSTRCKSTISSLLLSSFSNNTSSEATQSSLNVNKKKNNFSAATFRGFGCTAGASQRVSVPAVIRTSADWQGTRPRKKKHKRNGAKNNTTSQGGVVDGPNSGSANSVDFQDVWCGPGIGFSADVAAPVDCVMARKNVSARGKIDAEKIVHRERRRTVNPESIPFLNSETEIFSSRSESFGTARYYRHVPHPSSDGFAEMMMLQGNLIMGGRLNSHDHFRDWRLDIDNMSYEQLLELGERIGYVNTGLKEDEMGRYIRRFKLSKLNDPPKHQLDKKCSICQEEYEADDEVGRLRCEHSYHFQCLRQWLAQKNCCPVCKQDVVVRRSVAKS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0673 369 MobiDBLite consensus disorder prediction 109 141 - -
Bisa02g0673 369 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 47 360 IPR045191 GO:0061630
Bisa02g0673 369 MobiDBLite consensus disorder prediction 126 141 - -
Bisa02g0673 369 SUPERFAMILY RING/U-box 315 363 - -
Bisa02g0673 369 Pfam Ring finger domain 315 357 IPR001841 -
Bisa02g0673 369 FunFam E3 ubiquitin-protein ligase rnf12-A 283 362 - -
Bisa02g0673 369 ProSiteProfiles Zinc finger RING-type profile. 316 357 IPR001841 -
Bisa02g0673 369 SMART ring_2 316 356 IPR001841 -
Bisa02g0673 369 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 293 365 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0673 Bisa-ChrBisa02 11334248 11337086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0673 13 271 C3H Transcription Factor Family AT1G73760 39.643 1.86e-51 171