Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0666 ATGCCCATCTTCTCGTCTATTTATGAATGTTTCGTCCCCAGTGGAAGTGAAAAAGGTACTTCTGTATCTGAGGTTAGGGGTAGTCAATTAGTGCGTGTGGATTTTGAGGTAGTAGCAAGCAGCACCGTCCAATCAGTGTCTGTGGTTTCTGAGGCACCCATCAACTGCGTTCAATCTGAGGTACTCCATAGCCATGTCAACAGAAGTAAAGTCTTCGAGTATTCTGAACTTAGAGAAGCCACCGACAATTTTGACTGCAGTAGAAAGCTTGGGAGAGGAAGCTACGGGACCGTGTACCTTGGAATTCTTAGAGATGGGCATCATGTTGCAATAAAGCAGTTACATGAAGACAGGTTCAAGACCTTGAAATTACATGATGAGAATCTACAGAACGAGAAACTTGAAAGGGTCATGAGTGAAGTTTCATTGTTAACTCGTGTGAGCCATGAAAACCTTGTCCAACTGTATGGCTGTACCTCTCCTCAAACCCCTGATCTACTTTTAGTGCAAGAATACGTTTCCAATGGAACTCTCACTAATCATCTTCTTGGTCCACTAATGAAACCAGGCGCTCTTCCGTGGTATACTCGATTGAATATTGCTATACAAACTGCAAGTGCATTGGCTTATCTCCATGCTTCTAATATAATACACCGAGATGTGAAAACCAGCAACATTCTGCTTGACAAGAGTCTCAATGCAAAAGTCGCAGACTATGGATTATCACACCTTTTCCCACTTGGTGTCACCCATATTACGACTGATCCTGCTGGGACTCCTGGCTATATTGATCCAGAGTATTATGAGCACTGCCATCTTTCTGATAAGAGTGATGTATATAGCTACGGAGTAGTATTGATTGAGCTGATATCATCCCAGCCAGCATTTGTTGAGGATTATGATGAACATCCCTGTCTTTCTGACTTTGCCACTGATAAAATCCGTTCTGGACAACTCCGAACCCTTGTTGATCCTTATCTTGGATTTGAATTAGATGAGTGGATTAGCCACACAATTAGTGAAGTGGCAAAATTAGCATTGAGCTGTCTGGAACGCCACAGGGACATGAGACCTTCCATGGCTGAAGTGTTGGAAAGGCTTAAGAGCATTAAAGGTCAATAA 1122 0.4278 MPIFSSIYECFVPSGSEKGTSVSEVRGSQLVRVDFEVVASSTVQSVSVVSEAPINCVQSEVLHSHVNRSKVFEYSELREATDNFDCSRKLGRGSYGTVYLGILRDGHHVAIKQLHEDRFKTLKLHDENLQNEKLERVMSEVSLLTRVSHENLVQLYGCTSPQTPDLLLVQEYVSNGTLTNHLLGPLMKPGALPWYTRLNIAIQTASALAYLHASNIIHRDVKTSNILLDKSLNAKVADYGLSHLFPLGVTHITTDPAGTPGYIDPEYYEHCHLSDKSDVYSYGVVLIELISSQPAFVEDYDEHPCLSDFATDKIRSGQLRTLVDPYLGFELDEWISHTISEVAKLALSCLERHRDMRPSMAEVLERLKSIKGQ 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0666 373 SMART serkin_6 84 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0666 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Bisa02g0666 373 PIRSF ILK 54 373 - -
Bisa02g0666 373 ProSitePatterns Protein kinases ATP-binding region signature. 90 112 IPR017441 GO:0005524
Bisa02g0666 373 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 63 372 IPR044652 GO:0004672
Bisa02g0666 373 ProSiteProfiles Protein kinase domain profile. 84 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0666 373 Gene3D Phosphorylase Kinase; domain 1 54 172 - -
Bisa02g0666 373 SUPERFAMILY Protein kinase-like (PK-like) 67 365 IPR011009 -
Bisa02g0666 373 Gene3D Transferase(Phosphotransferase) domain 1 173 373 - -
Bisa02g0666 373 Pfam Protein kinase domain 87 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0666 Bisa-ChrBisa02 11286846 11289198 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0666 71 373 Receptor kinase-like Gene Family AT1G25390 50.164 5.76e-97 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Bisa02g0666 Pkinase 1.7e-48 CL0016