Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0645 ATGGATGTAAAGGGAAGCGGAATTAGCAACTCCACCACCCTCCAGCAAAACGACGTCGTCGACGACCTCGACCTCCGACGAGGCCCCTGGACCGTCGATGAGGACCTCACTCTCATCAATTACATTGCCAGTCACGGCGAAGGTCGCTGGAATTCCCTCGCTCGCTCCGCCGGCCTTAAACGTACTGGTAAGAGCTGCAGATTGAGGTGGCTCAATTATCTCCGTCCCGATGTTCGACGTGGAAATATCACTCTTGAAGAACAACTTCGCATTCTTGAGCTCCATTCTCACTGGGGAAACAGATGGTCCAAGATTGCTCAGTACTTGCCTGGAAGAACCGACAATGAGATCAAGAATTACTGGAGAACTCGTGTTCAGAAACATGCCAAGCAACTTAAATGTGACGTGAATAGCAAGCAATTCAAGGACACCATGCGCTACCTCTGGATGCCCCGCCTGGTCGAGCGCATTCAGGCCGCCGCTTCTGCCGCCGCCGATTCTCAATCCTTATCTACCACCACCACGCTCACCGCCAACACCACATACAACTACAACAACAACAACCTTGAAAGTAACATGGAGGTTGAGAATGGGAACATGCTGATAACACCAGCACCGGCATTTATGAACAACAACGTTAGCGTCAACGACTTCGGGGGTTCACAAGTCACAACACAGAGCTACACGCCGGATAATAGCAGCACGGGAGCCTCATCGGAGTCGTTTGGGACGGTGTCGGAATTGACTGATTATAATTACAGCACAGTCCCAAACATAAGCAACAGCGACAACAATAATTACTCTGCTCAGGAATACTACCAACCCTCTCAGATTAGTTATTCCGATTGCATCACAAGCCCATCGGGCCTCTTGTTCCCTCAAGGAATGGGTTATTCCCAAGTCATGGAGCCAAACAACCCCTGGATTCAGAGCGGGGACACATTGGACAATTTTTGGGATGTTGACAACATGTTTTTACAGCAGCAGCTCAATATTGACAGCATGTAA 1008 0.497 MDVKGSGISNSTTLQQNDVVDDLDLRRGPWTVDEDLTLINYIASHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLRILELHSHWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAASAAADSQSLSTTTTLTANTTYNYNNNNLESNMEVENGNMLITPAPAFMNNNVSVNDFGGSQVTTQSYTPDNSSTGASSESFGTVSELTDYNYSTVPNISNSDNNNYSAQEYYQPSQISYSDCITSPSGLLFPQGMGYSQVMEPNNPWIQSGDTLDNFWDVDNMFLQQQLNIDSM 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0645 335 FunFam Myb transcription factor 27 79 - -
Bisa02g0645 335 Gene3D - 24 80 - -
Bisa02g0645 335 CDD SANT 84 123 IPR001005 -
Bisa02g0645 335 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 24 199 IPR044676 GO:0003700|GO:0006355|GO:0043565
Bisa02g0645 335 ProSiteProfiles Myb-like domain profile. 22 74 IPR001005 -
Bisa02g0645 335 Pfam Myb-like DNA-binding domain 27 74 IPR001005 -
Bisa02g0645 335 Pfam Myb-like DNA-binding domain 80 123 IPR001005 -
Bisa02g0645 335 SUPERFAMILY Homeodomain-like 24 121 IPR009057 -
Bisa02g0645 335 Gene3D - 84 147 - -
Bisa02g0645 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 74 IPR017930 -
Bisa02g0645 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 129 IPR017930 -
Bisa02g0645 335 FunFam MYB transcription factor 84 147 - -
Bisa02g0645 335 SMART sant 79 127 IPR001005 -
Bisa02g0645 335 SMART sant 26 76 IPR001005 -
Bisa02g0645 335 ProSiteProfiles Myb-like domain profile. 75 125 IPR001005 -
Bisa02g0645 335 CDD SANT 29 74 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0645 Bisa-ChrBisa02 10963044 10964652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0645 23 171 MYB Transcription Factor Family AT1G48000 76.510 3.28e-85 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa02g0645 Myb_DNA-binding 7.1e-15 CL0123