Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0628 ATGCGGGTTTCTGGACCCTTCGTCTGTTACCGGTTGTGGCTAAACTCATTGCTTGGCTGTTTGGATTTTATGCGGATTCTTGTTATCAGGAATCAGAGGGGTGTTTGTTACCTTGATGAGATACTACGGGAAGCAGAGCACCGCTGGCTTCGACCTCCTGAAATCTGCGAAATACTTCGCAATTATCATAAGTTTGAGTTAACAAAAGATCCACCTGTTAGACCTCCAGCTGGATCCCTATTCTTATTTGATCGAAAGGCACTACGTTACTTTCGCAAAGATGGTCACAGATGGAGGAAGAAAAAAGATGGGAAAACTATCAAAGAAGCTCATGAAAAGTTGAAGGCTGGCAGTGTGGATGTTTTGCATTGTTACTATGCTCATGGGGAGGATAATGAGAACTTTCAACGGCGAAGTTATTGGATGCTTGATGAACAGTTAGAGCACATCGTCCTTGTTCATTATCGAGAGGTTAAAGAGGGCTACAAGACTGCCATTTCTCATTCGCCTGTAGACTCAGTACCCTTGGTTGGTAGCCGTCAGAGTAGTTCTGCACAATTAAACTTGCCTGTTTCCTTAGCACAAACATCTTATGCTTCAAGTGCAAATAGAGTTTATTGGAATGGAAGAGCACTATCTTCAGAGTATGAAGATGTGGACTCTGCAAGTGGTTATCGAGCCTCATCTCATACTCAACCTATCAGGAGTTCCCTGCCTGGTAGTGCACCTCTGCTCACACATGAAGCTACTGGATTTTCTCTGTCACGGAGCTCCTACAATTCACAGTCATCTCTCCCTAGCTTTTATCCTGGCGCTTGCTCATCTCCATGGCCATTAAATCAGAACTCAAGCAGAAACACAGTTAGTATGCATCATGGAAATCTTGATGTTGAAGGATCCAATGAAGGCTGCAAAACTGATTTCATTGTTCAAAGGCTAGGAGATGCAATGTTAGATGGAGGTAGCACCATTCAAGATGCTATAACTTGCAGTGATAGGCTGTTCAGTGACATGTACTTCCCGGCAGTTATTGGACCTTTAGAGACACTAAATCAGGTACAAGAGGATCATGATTTAAATTCAGATCATACCCAATTCCATGATCATACTGATAATCCAGCTGTCACATCTTCAGCTGTCCAAGCTGAATCAAAATTAAACGAGGACACTACATCTAAAGGTGAATTGGAACATTTTGAATCTGGAGAGCTGAAGAAACTTGATAGTTTTGGAAGGTGGATGGATAGGGAAATTGGTGGAGACTGTGATGATTCCTTAATGGCTTCAGACTCTGGCAACTATTGGAATACACTTGATGCTCATAATGGGGATAAAGAAGCGTCCAGTTTACATATGCAGTTGGATATGGATTCATTGGGTCCCTCTCTTTCCCAAGAACAACTATTTAGCATCCAAGAATTTTCTCCAGATTGGGCATATGCTGGGGTTAAAACAAAGGTTTTAATAGTTGGCTCATTTCTGGGGAGTAAGAAGCTTTCTACTGAGACAAAGTGGGGATGTATGTTTGGTGAAATTGAGGTTTCTGCTGAAGTTTTGACTGATAATATCATACGGTGTGAGACTCCTTTTCATTCACCAGGTCGTGTTCCATTCTATGTTACCTGCAGTAATAGGTTAGCCTGCAGTGAGGTGAGAGAATTTGAATATCGTGAAAACCCAACTGTTGGTCCTATGGGTATTAGAATCACACCTGAAGATGAAGTACGCCTTCAGTTGCGACTACTAAAGTTAATAGACCTGAGACCTGAAAAAAACTGGTTGAACTGCTCTGTTTCTCAATGTGAGAAATGTAAGCTAAAAGGAACTATGTACTCAATGACAGATGAGAGTGAAATATCTCGAGATACTTTGAAGATTGATAGAAGTGATTATGTAAATCCTAGAGATCTGTTAGTACAAAGGTTCTTGAAAGACAAGCTTTACAAGTGGTTGGTGTTTAAGGTCCATGAAGAAGGAAAAGGACCACATGTGTTGGATAATGAAGGCCAAGGAGTAATACATTTGGCAGCTGCTCTGGGTTATGCATGGGCTCTGGGTCCCTTAGCTGCTGCTGGTGTCAGTCCTAACTTTAGAGATGCTCGTGGAAGAACAGGACTTCACTGGGCATCATATTTTGGGAGAGAGGAGACTGTGATTACACTAGTCAAATTAGGTGCATCCCCAGGGGCTGTTGAGGATCCCACATCAGCATTTCCTCGAGGACCAACAGCTGCTGATTTAGCTTCAAGTAGAGGACATAAAGGCATTGCAGCATATCTGGCTGAGGCTGATCTGACAAGCCACTTGTCTACATTGATTGTCAATGAAAATGAGATCGACAATGTTGCTGCAGCCAGAGCAGCTGATGGTGCTTTTGAAACTGCTCAAGCTGACTCATCTAATATGACAATAAACGAGCAACGCCATCTGAAAGAGTCACTTGCAGTCTTCCGAAAATCAGCTCATGCAGCTGCATTAATTCAAGCTTCTTTTAGAGCAAGATCATTCCGCCAGAGACAATTAACCAAAACTAGTAGTAATATATCTGAAGAAGCACTCAACCTAGTTGCAGCTGGCTCTTTGAACAAGTTTCAAAAGATGGGCCACTTTGAAGATTATCTTTATTCCGCAGCTTTAAGGATCCAAAAGAGATATCGTGGTTGGAAGGGAAGAAAAGAATATTTGAAGATACGTAACCGTATTGTAAAAATTCAGGCCCATGTTAGAGGACATCAAGTTCGTAAGCAGTACAAAAAGGTTGTTTGGTCTGTTAGCATTGTGGAGAAGGCGATACTGCGTTGGAGACGGAAAGGTACTGGTCTGCGAGGATTTCGAGTTGAGCAGCCAGTTGGCATTATGGCTCCGGGTGCAGAGAAAAGTGATGAATATGAATTTCTGAGCATTGGGCGGAGACAGAAATCTGATGATGTTAATAAGGCTCTGGCTAGAGTTAAGTCCATGGTTCATCATCCAGAGGCACGTGATCAGTATATGAGGCTTGTCATGAAATTTCAGAATTTCGAGATTGGTGATAGTGGAAGCAGTTAA 3048 0.4232 MRVSGPFVCYRLWLNSLLGCLDFMRILVIRNQRGVCYLDEILREAEHRWLRPPEICEILRNYHKFELTKDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKTIKEAHEKLKAGSVDVLHCYYAHGEDNENFQRRSYWMLDEQLEHIVLVHYREVKEGYKTAISHSPVDSVPLVGSRQSSSAQLNLPVSLAQTSYASSANRVYWNGRALSSEYEDVDSASGYRASSHTQPIRSSLPGSAPLLTHEATGFSLSRSSYNSQSSLPSFYPGACSSPWPLNQNSSRNTVSMHHGNLDVEGSNEGCKTDFIVQRLGDAMLDGGSTIQDAITCSDRLFSDMYFPAVIGPLETLNQVQEDHDLNSDHTQFHDHTDNPAVTSSAVQAESKLNEDTTSKGELEHFESGELKKLDSFGRWMDREIGGDCDDSLMASDSGNYWNTLDAHNGDKEASSLHMQLDMDSLGPSLSQEQLFSIQEFSPDWAYAGVKTKVLIVGSFLGSKKLSTETKWGCMFGEIEVSAEVLTDNIIRCETPFHSPGRVPFYVTCSNRLACSEVREFEYRENPTVGPMGIRITPEDEVRLQLRLLKLIDLRPEKNWLNCSVSQCEKCKLKGTMYSMTDESEISRDTLKIDRSDYVNPRDLLVQRFLKDKLYKWLVFKVHEEGKGPHVLDNEGQGVIHLAAALGYAWALGPLAAAGVSPNFRDARGRTGLHWASYFGREETVITLVKLGASPGAVEDPTSAFPRGPTAADLASSRGHKGIAAYLAEADLTSHLSTLIVNENEIDNVAAARAADGAFETAQADSSNMTINEQRHLKESLAVFRKSAHAAALIQASFRARSFRQRQLTKTSSNISEEALNLVAAGSLNKFQKMGHFEDYLYSAALRIQKRYRGWKGRKEYLKIRNRIVKIQAHVRGHQVRKQYKKVVWSVSIVEKAILRWRRKGTGLRGFRVEQPVGIMAPGAEKSDEYEFLSIGRRQKSDDVNKALARVKSMVHHPEARDQYMRLVMKFQNFEIGDSGSS 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0628 1015 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 867 924 IPR027417 -
Bisa02g0628 1015 MobiDBLite consensus disorder prediction 364 391 - -
Bisa02g0628 1015 Pfam CG-1 domain 44 157 IPR005559 GO:0003677
Bisa02g0628 1015 SMART CG_1_2 41 159 IPR005559 GO:0003677
Bisa02g0628 1015 FunFam Calmodulin-binding transcription activator 2 464 561 - -
Bisa02g0628 1015 Gene3D - 639 771 IPR036770 -
Bisa02g0628 1015 ProSiteProfiles IQ motif profile. 874 903 IPR000048 GO:0005515
Bisa02g0628 1015 ProSiteProfiles IQ motif profile. 897 925 IPR000048 GO:0005515
Bisa02g0628 1015 ProSiteProfiles Ankyrin repeat profile. 701 733 IPR002110 GO:0005515
Bisa02g0628 1015 ProSiteProfiles CG-1 DNA-binding domain profile. 38 164 IPR005559 GO:0003677
Bisa02g0628 1015 CDD IPT 470 558 - -
Bisa02g0628 1015 MobiDBLite consensus disorder prediction 370 387 - -
Bisa02g0628 1015 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 40 1005 - -
Bisa02g0628 1015 SMART ANK_2a 740 769 IPR002110 GO:0005515
Bisa02g0628 1015 SMART ANK_2a 701 730 IPR002110 GO:0005515
Bisa02g0628 1015 SUPERFAMILY E set domains 471 557 IPR014756 -
Bisa02g0628 1015 Gene3D Immunoglobulins 464 563 IPR013783 -
Bisa02g0628 1015 Pfam IQ calmodulin-binding motif 900 918 IPR000048 GO:0005515
Bisa02g0628 1015 Pfam IQ calmodulin-binding motif 876 894 IPR000048 GO:0005515
Bisa02g0628 1015 SMART iq_5 819 841 IPR000048 GO:0005515
Bisa02g0628 1015 SMART iq_5 896 918 IPR000048 GO:0005515
Bisa02g0628 1015 SMART iq_5 873 895 IPR000048 GO:0005515
Bisa02g0628 1015 Gene3D - 872 921 - -
Bisa02g0628 1015 Pfam IPT/TIG domain 471 556 IPR002909 -
Bisa02g0628 1015 FunFam Calmodulin-binding transcription activator 2 873 921 - -
Bisa02g0628 1015 ProSiteProfiles Ankyrin repeat region circular profile. 701 727 - -
Bisa02g0628 1015 SUPERFAMILY Ankyrin repeat 654 763 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0628 Bisa-ChrBisa02 10774176 10781209 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0628 82 1001 CAMTA Transcription Factor Family AT2G22300 40.844 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Bisa02g0628 CG-1 2.9e-49 No_clan