Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0623 ATGGGCTGCTTCAACTTTTGCAAAAGGAGTGATGATTATAAGACTGCTGATAATGGACCCTTCATGCCAAAGCCAAACTATACTACTGGGAACACTGGTTATCAAGGTAGACAAGTTTCAACAACTCCTCCACGTACTGGAAATGTTCAACCCATTGCTGTCCCTTCCATTTCAATCGATGAGATGAAGTCTCTGACTGATAATTTTGGCTCAAAATCTTTCATCGGTGAGGGTGCATACAGTAAGGTGTATCATGGTGTATTAAAAAATGGGCGTGATGTGGCAATTAAGAAGTTAGATTCCAGTAGACAACCAGACCAAGAACTTCTTGCTGAGGTCTCAATTGTATCAAGGCTAAAGCATGAAAATGTTGTTGAGCTTCTTGGTTATTGTGTTGAAGGCCCTTTCCGAGCCCTTGCCTACGAGTATGCTCCTAAAGGATCCCTTCATGATATTCTACACGGACGCAAAGGTGTGAAGGGTGCACAACCTGGTCCAGTATTGTCATGGGCACAGAGAGTTAAGATTGCTGTAGGGGCATCCAGAGGACTTGAATATCTACATGAAAAAGCAGAGCCTCATATTATCCATCGTTATATCCAGTCTAGCAAAATACTTCTTTTTGATGATGACGTTGCAAAAATTGCTGATTTTGATTTATCAAACCAAGCGCCTGATGCTGCTGCACGTCTCCATTCTACTCGTGTTCTTGGGACCTTTGGTTATTATGCTCCAGAATATGCCATGACGGGTCAGCTCACTTCAAAAAGTGATGTTTATAGCTTTGGAGTTATTCTGCTTGAACTCTTAACTGGAAGGAAGCCTGTCGATCATACACTGCCGCGAGGGCAGCAAAGCCTTGTCACCTGGGCAACGCCAAAGCTGAGTGAGGACAAGGTGAAGCAGTGTGTGGATATTAGACTAAAGGGAGATTATCCTCCAAAGGCAGCTGCAAAGATGGCTGCTGTCGCTGCACTGTGCGTGCAATACGAAGCAGGGTTTCGTCCAAATATGAGCATTGTAGTGAAAGCTCTTCAGCCTCTACTCAATTCTCGTTCTTCTGTTCACCCAAAGCAGCCTCCCAACTTGTAG 1092 0.4423 MGCFNFCKRSDDYKTADNGPFMPKPNYTTGNTGYQGRQVSTTPPRTGNVQPIAVPSISIDEMKSLTDNFGSKSFIGEGAYSKVYHGVLKNGRDVAIKKLDSSRQPDQELLAEVSIVSRLKHENVVELLGYCVEGPFRALAYEYAPKGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGASRGLEYLHEKAEPHIIHRYIQSSKILLFDDDVAKIADFDLSNQAPDAAARLHSTRVLGTFGYYAPEYAMTGQLTSKSDVYSFGVILLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDIRLKGDYPPKAAAKMAAVAALCVQYEAGFRPNMSIVVKALQPLLNSRSSVHPKQPPNL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0623 363 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Bisa02g0623 363 ProSiteProfiles Protein kinase domain profile. 69 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0623 363 CDD STKc_IRAK 75 348 - -
Bisa02g0623 363 FunFam pto-interacting protein 1 145 356 - -
Bisa02g0623 363 Pfam Protein tyrosine and serine/threonine kinase 74 345 IPR001245 GO:0004672|GO:0006468
Bisa02g0623 363 SUPERFAMILY Protein kinase-like (PK-like) 47 345 IPR011009 -
Bisa02g0623 363 Gene3D Phosphorylase Kinase; domain 1 36 143 - -
Bisa02g0623 363 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 14 353 - -
Bisa02g0623 363 Gene3D Transferase(Phosphotransferase) domain 1 145 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0623 Bisa-ChrBisa02 10677246 10680055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0623 50 359 Receptor kinase-like Gene Family AT4G02010 46.605 1.57e-87 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Bisa02g0623 PK_Tyr_Ser-Thr 1.9e-45 CL0016