Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0617 ATGGCTATCGTAAGCGTGGGGAAGAAGAACCAGAAGGAGGAAGAAGGATTGAGGCTGGGGAAGTACGAAGTTGGTAGGCTTCTTGGCAAAGGTAGCTTCGGAAAAGTCAGATTGGCCAGAAACATCGATTCTGATGAATCTGTTGCCGTTAAGATTGTCGACAAGTCCAGGATCATCCACCTTAATATCACTCATCAGATAAAGAGGGAGATAGCCACATTGAAGCTCCTGAAGCATCCTAACGTCGTCAGATTACACGAGGTTTTGGCTAGCAAAACCAAAGTTTACATGGTCCTACAACATGTCAGTGGAGGAGAATTATTTGACAGAGTTGCATCCAAAGGTAAACTTAAAGAAACTGAAGGTAGGAAGCTTTTCCAACAGTTAATTGATGGTCTGAGCTACTGTCACAATAAAGGTGTTTTCCACAGGGATCTCAAGCTGGAGAATGTTCTTTTGGATTCCGAAGGAAACATAAAGATAACAGATTTTGGCCTCAGTGCAATACCCCAGCACATTAGGGCTGATGGGTTGCTGCATACAACCTGTGGAAGTCCCAACTATGTTGCACCAGAGGTACTTGCTAATAGAGGCTATGACGGGGCAACATCGGATACATGGTCATGTGGTGTTATCTTGTTCGTAATGCTGACAGGATATCTACCTTTTGATGATCGAAATATTGCTGTTCTGTATCAAAAGGTTGCCAGAGGAGATGTTAGGATACCAAAATGGCTATCGTCTGGTGCCCAGAACTTAATAAGGAGGATTCTTGATCCCAACCCTGTTACCCGGATAACACTCGCTGGTATCAAAGAACATGAATGGTTTAGGAATGACTATGTTCCAGCAAATCCTGAGGATGAAGAAGTGGAAGAGGATGTCTATATTGACGATGAAGCCTTGTCAATCCATGAAATGCCCCGTGAAGCAGAACATAAGAGTCCGGAGTCACCAACCCTTATCAATGCATTTCAGTTGATAGGGATGTCTTCATGCTTAGACCTATCTGGCTTCTTCGAGAAAGAGGATGTCTCTGAGAGGAAGATAAGGTTTACATCCAACCATTCAGCAAAAGATCTGATTGAGAAGATTGAGGACATTGGAACAGAAATGGGATGTAGAGTCCAAAAGAGAAATGGAAAGTTGAAAGTGATACAAGAGAAGGAGCAGAAAAGTCAAGGTAGCCTCTCAGTGGCAGCAGAGGTGTTTGAAATAAGCCCTTCCTTGCATGTGGTAGAATTAAGGAAATCTTATGGAAACTCTGCCGTGTATAGACAGTTGTGCAATAAATTATCAAATGAGTTGGCAGTACGCCCAAACGGAGCACTAGCGAGCTCAGAATCAGAAGTCAGGAGGGTTGAGGAATGA 1371 0.434 MAIVSVGKKNQKEEEGLRLGKYEVGRLLGKGSFGKVRLARNIDSDESVAVKIVDKSRIIHLNITHQIKREIATLKLLKHPNVVRLHEVLASKTKVYMVLQHVSGGELFDRVASKGKLKETEGRKLFQQLIDGLSYCHNKGVFHRDLKLENVLLDSEGNIKITDFGLSAIPQHIRADGLLHTTCGSPNYVAPEVLANRGYDGATSDTWSCGVILFVMLTGYLPFDDRNIAVLYQKVARGDVRIPKWLSSGAQNLIRRILDPNPVTRITLAGIKEHEWFRNDYVPANPEDEEVEEDVYIDDEALSIHEMPREAEHKSPESPTLINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNHSAKDLIEKIEDIGTEMGCRVQKRNGKLKVIQEKEQKSQGSLSVAAEVFEISPSLHVVELRKSYGNSAVYRQLCNKLSNELAVRPNGALASSESEVRRVEE 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0617 456 ProSiteProfiles NAF domain profile. 317 341 IPR018451 GO:0007165
Bisa02g0617 456 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Bisa02g0617 456 Gene3D Transferase(Phosphotransferase) domain 1 102 305 - -
Bisa02g0617 456 Pfam Protein kinase domain 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0617 456 Gene3D Kinase associated domain 1, KA1 316 438 - -
Bisa02g0617 456 ProSiteProfiles Protein kinase domain profile. 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0617 456 Pfam NAF domain 319 378 IPR004041 GO:0007165
Bisa02g0617 456 CDD CIPK_C 323 433 - -
Bisa02g0617 456 FunFam Non-specific serine/threonine protein kinase 15 319 - -
Bisa02g0617 456 SMART serkin_6 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0617 456 Gene3D Phosphorylase Kinase; domain 1 10 101 - -
Bisa02g0617 456 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 11 421 - -
Bisa02g0617 456 SUPERFAMILY KA1-like 350 437 IPR028375 -
Bisa02g0617 456 FunFam Non-specific serine/threonine protein kinase 319 439 - -
Bisa02g0617 456 SUPERFAMILY Protein kinase-like (PK-like) 18 292 IPR011009 -
Bisa02g0617 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Bisa02g0617 456 FunFam Non-specific serine/threonine protein kinase 13 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0617 Bisa-ChrBisa02 10595546 10600972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0617 85 432 CBL-interacting serine-threonine protein kinases AT3G17510 70.774 2.07e-177 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bisa02g0617 Pkinase 2.6e-70 CL0016