Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0605 ATGGGTTTATGTGTTGAGGAGTCAATCTCTGGTTTGGCAATAGGTCAAGCAATCTACGAGGCAGCTCTAATAATTGCAGTTCTGAGATGGGTTTTTTGCTGGGTTTCCAAAGTTATCAGAGATAGAAGGACCCACGCCCTTCAGACCCCCACAGAACACTCATCATCATCATCATCTTCTTCTCCTTCTTCTTCATGGCTCTTTTCCCAGATGATAAGAGACAGTACTCTGACTCCGAGGACCTTCGGTGAAATAAAGGAGAGGGTGCCAGAAACACAGGACACGTGTGCTGTGTGCCTGAACCAGTTAACGATGGAGGACGAGGTGAGAGAGCTCCTGAACTGTGACCACATATTCCACAGAGAGTGCATAGACAGATGGCTGGACCATGATCATGACAATCACAACCCCACTTGCCCTCTCTGCAGAGCCCCTTTGCTCACTTCTTATTGCTCATCAGATTCAGAAAGCTCTAGCTGTATGCCTCCTCCTCACCCTCACCCTAGCTGGGCTGTGGAGAGACTTCTCTATCTCTTTGGGGATGATCTGCCAATTTGTTAG 561 0.4813 MGLCVEESISGLAIGQAIYEAALIIAVLRWVFCWVSKVIRDRRTHALQTPTEHSSSSSSSSPSSSWLFSQMIRDSTLTPRTFGEIKERVPETQDTCAVCLNQLTMEDEVRELLNCDHIFHRECIDRWLDHDHDNHNPTCPLCRAPLLTSYCSSDSESSSCMPPPHPHPSWAVERLLYLFGDDLPIC 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0605 186 Pfam Ring finger domain 94 143 IPR001841 -
Bisa02g0605 186 SMART ring_2 96 142 IPR001841 -
Bisa02g0605 186 SUPERFAMILY RING/U-box 95 149 - -
Bisa02g0605 186 PANTHER RING ZINC FINGER PROTEIN-RELATED 24 182 - -
Bisa02g0605 186 ProSiteProfiles Zinc finger RING-type profile. 96 143 IPR001841 -
Bisa02g0605 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 47 148 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0605 Bisa-ChrBisa02 10456770 10457330 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0605 10 185 C3H Transcription Factor Family AT5G20885 46.561 1.38e-40 134