Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0599 ATGGCTCCTTCCTCAACCAGAGGACTGTTACGAACACCCACATTCACCTTCACCTTCCTCTTCATATGGATGTTGATCACCCCTTTGGGCTCTGGTACTGGGGTCGATCTGGTGGGGTCAGATTCTTTGAAGGTTTCGTCCTCTGAGTTCGTCGCCTCCGTCAGAACAGTCGTCGATGTGTTACAACAGGTTGCCTCCATCTTGTCCCGCTTCGGCGGCGTTTTCGGAGATTCCCGTGTTTCTAATGCGGTCTCCGACTGCCTCGACTTGCTCGACATGTCCTCCGACGAGCTCACCCAGTCTGCTTCTGCTTCTCAGTCCCCCAAAGGCAAGCATAACAGCACTGGGAACCTGAGCTCTGATCTGAGGACATGGTTGAGTGCTGCGCTGGCGAATCCAGAGACATGCATGGAGGGATTTGAAGGTACAAACAGCATTGTGAAGGGTCTGATATCAGGTGGGTTGGGACAAGTGAGCTCACTTGTTCAACAGCTACTGAGCCAAGTGCACCCTGCGTCCGATCATTCTTCGAGAAAGAAGGCTCGATTCCCTTCGTGGGTTAGACCGAGAGAGCGCAAGCTGCTTCAGGCGAATGGGGTGGCGGCGGATGTGGTGGTGGCTGCCGATGGGACTGGGCACTACACGAAGGTGATCGATGCAGTGGCTGCAGCTCCAGATTACAGCATGAAACGGTATGTGATCTACATAAAGAGGGGAGTATACAACGAGAACGTGGAGATCAAGAAGAAGAAGTGGAACCTGATGATGATTGGGGATGGTATGGATGCCACTGTCATCTCCGGCAACCGCAGTTTCATCGATGGTTGGACCACTTTCCGGTCGGCTACTTTTGCTGTTAGCGGCAGAGGGTTCATTGCACGAGACCTGTCCTTCCAGAACACTGCCGGCCCGGAGAAGCACCAAGCCGTGGCGCTCCGGTCCGACTCCGACCTCTCCGTTTTCTACCGATGCGGGATCTTCGGGTACCAGGACAGCCTCTACACCCACACGATGCGTCAGTTCTACAGAGAATGCAAGATCGCCGGCACGGTGGACTTCATCTTCGGCGACGCCACCGCCGTCTTCCAGAACTGCCTGCTGCTCCCGAAGAAGGGCCTTCCGAATCAGAAGAACACCATCACGGCTCAGGGCCGGAAGGACCCGAACGAACCGACCGGTTTCTCCTTCCAATTCTGCAACGTGTCTGCAGATTCAGATCTGTTGCCCTTGGTCAACTCCACTCAGACCTACCTCGGAAGGCCGTGGAAGGCGTACTCGCGGACGGTGTTTATGCAATCGTATATGAGCGATGTGCTGAGGCCGGAGGGATGGCTAGAGTGGGACGGAGATTTTGCTTTGGACACACTGTATTATGCAGAGTACATGAACAGCGGAGCAAGGGCCGGCGTAGAGAAGAGAGTGAAATGGCCAGGTTTTCAAGCGTTGAATGATTCAAACCAGGCCAGTAACTTCACTGTGGCTCAGTTTATTGAGGGTAATCTGTGGTTACCCTCCACTGGTGTGACCTACACCGCAGGATTGGGGGTTTAA 1551 0.5435 MAPSSTRGLLRTPTFTFTFLFIWMLITPLGSGTGVDLVGSDSLKVSSSEFVASVRTVVDVLQQVASILSRFGGVFGDSRVSNAVSDCLDLLDMSSDELTQSASASQSPKGKHNSTGNLSSDLRTWLSAALANPETCMEGFEGTNSIVKGLISGGLGQVSSLVQQLLSQVHPASDHSSRKKARFPSWVRPRERKLLQANGVAADVVVAADGTGHYTKVIDAVAAAPDYSMKRYVIYIKRGVYNENVEIKKKKWNLMMIGDGMDATVISGNRSFIDGWTTFRSATFAVSGRGFIARDLSFQNTAGPEKHQAVALRSDSDLSVFYRCGIFGYQDSLYTHTMRQFYRECKIAGTVDFIFGDATAVFQNCLLLPKKGLPNQKNTITAQGRKDPNEPTGFSFQFCNVSADSDLLPLVNSTQTYLGRPWKAYSRTVFMQSYMSDVLRPEGWLEWDGDFALDTLYYAEYMNSGARAGVEKRVKWPGFQALNDSNQASNFTVAQFIEGNLWLPSTGVTYTAGLGV 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0599 516 Gene3D - 197 514 IPR012334 -
Bisa02g0599 516 Pfam Plant invertase/pectin methylesterase inhibitor 60 164 IPR006501 GO:0004857
Bisa02g0599 516 SMART PMEI_2 33 168 IPR006501 GO:0004857
Bisa02g0599 516 PANTHER PECTINESTERASE 51 504 - -
Bisa02g0599 516 ProSitePatterns Pectinesterase signature 1. 228 247 IPR018040 -
Bisa02g0599 516 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 170 IPR035513 -
Bisa02g0599 516 MobiDBLite consensus disorder prediction 99 118 - -
Bisa02g0599 516 SUPERFAMILY Pectin lyase-like 200 513 IPR011050 -
Bisa02g0599 516 CDD PMEI-like_4 34 171 - -
Bisa02g0599 516 FunFam Pectinesterase 197 514 - -
Bisa02g0599 516 ProSitePatterns Pectinesterase signature 2. 347 356 IPR033131 -
Bisa02g0599 516 Pfam Pectinesterase 203 500 IPR000070 GO:0030599|GO:0042545
Bisa02g0599 516 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 52 162 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0599 Bisa-ChrBisa02 10330572 10334158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0599 18 514 Carbohydrate Esterase AT3G43270 62.984 0.0 694