Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0581 ATGCCTGTCTCTCCTTCATTGCTTCGCCTCTATTTCTCTATTTCATTTCATGTTGTAATGAAGGCTCCGACTAACGGTTACTTGCCCAATTCTGGTGAAGGGGAAAGAAAAACCATTAACTCAGAGTTATGGCATGCTTGTGCTGGACCGTTGGTTTCTTTGCCTCCTGTTGGAAGTCTTGTTGTTTACTTCCCTCAAGGACATAGTGAGCAAGTTGCTGCATCGATGCAAAAGGAGGCTGATATCGTTCCCAGTTATCCTAACCTTCCATCGAAGTTGATTTGCATGCTTCACAATGTTGCCTTGCATGCTGATATTGAAACTGATGAGGTTTATGCACAGATGACTCTTCAACCTGTAAACAAATATGAAAAGGAAGCAATACTGGCATCAGAGATGGGTCTTAAGCAAAGCCGACAACCTACTGAATTCTTCTGCAAAACTCTTACAGCTAGTGACACAAGCACTCATGGTGGATTTTCTGTACCACGTAGAGCAGCTGAGAAAATATTTCCAGCTCTGGATTATTCAATGCAACCTCCAGCTCAGGAGCTTGTTGCCAAAGATTTGCATGATAATACATGGACATTCAAGCATATTTATCGCGGACAACCTAAAAGGCATCTACTAACAACTGGTTGGAGTGTTTTTGTTAGCACAAAAAGATTGTTCGCTGGAGATTCTGTTCTTTTTATCAGAGATGAAAAACAGCAACTTCTTTTAGGTATAAGGCACGCCATTAGGCAGCAATCAGCTCTCTCTTCGTCAGTCATATCCAGTGACAGCATGCATATTGGCATTCTTGCTGCTGCAGCTCATGCTGCTGCAAATAACAGCCCGTTTACAATATTTTACAATCCAAGGGCCAGCCCTGCTGAATTTGTTGTTCCATTGGCGAAGTATAACAAAGCCTTGTATACTCAAGTCTCACTTGGAATGAGATTTAGAATGATGTTTGAGACTGAGGAGTCAGGAGTGCGCAGATACATGGGTACAGTCACTGGGATCAGTGACTTAGATCCTGTACGATGGAAGAACTCACAGTGGCGCAATCTTCAGGTTGGATGGGATGAATCAACGGCTGGAGAGCGCCCAAGCAGAGTTTCGATTTGGGAAATCGAACCAGTGGTGACTCCTTTTTACATTTGCCCACCTCCTTTTTTCAGGCCCAAGTTCCCCAAGCAACCGGGAATGCCAGATGATGAGTCTGATATAGAAAATGCTTTCAAGAGAGCTATGCCCTGGCTTGGAGATGACTTCAGCATGAAGGATGCGTCAAACTCCATCCTTCCTGGTTTGAGTCTAGTGCAGTGGATGAGCATGCAGCAGAATAGTCAGCTTTCTGCTGCTCAATCAGGGATTTTCCCTTCCGTGCTTTCATCTAATTCCATGCATAATAACCTCAGCACTGATGATCCAGCCAAGTTATTGAGTTTTCAATCCCCTGTACTCTCTTCACAGAGTATTCAATTTAACAAATCTAATTTGCCAAATCAAGTGAACCAATTGCAACAGTCTCCCGCCTCGTGGACTCAGCAGCAGCAGCAGCTGCAGCCATTGTCGCAAACGCCGGTAAACCAGCTCCAGCAGCAGAGGCAGCAGCAGCCTGAACTGCAGAATCTGCCACCACAGCAGCAACTACAGCAACAACAGCAGTCACAGCACCAGCAACAACAGCAACACGCTGTTATGAATAATGGGATAGTTGCTTCTAGTCGGATACTGAGTCAGAGTGTACAACAACCAGTATCCTACTCTCAGCTTCAGCAGCAGCAAATGCTCTCGGGCAATATCCCTCCCCAGCAAAGTATTCAACCGACTAGTAAGAATATATTCCCATTGCCATCCTTACCACAAGATTCACAATTCCAGCAACAGATAGACCAGCAAGCTTGTCTCTTACAGAGACAGCAGCAGCAGACACAGTTTCAACAACCCCCAATGCAGTTATTGCAACAGAACCTGTCACAAAGGCCACCACAGCAACTACAAGCGACTCAACTTTCTCAGCAAAACCTCTCAGAGCAACAACTGCAGTTGCAGTTGCTACAGAAATTGCAGCAGCAACAACAGCAACTTCTTCCCTCATCAAGCCCATTGTTGCAGCCTCCACTGGTACAGCAACAAAATGCTAACCAACAAAACCAGCAATTACCACAGATGCCTGTGTCTCAGCATCAGCCTCAGCAGCTTAGCAACACTGCTTTCTCAACAGAGAAGCTTCTGAACAGCAACGGCTTTTCTTCTTCAGCTCTCATGCAGTCACAACAGCTTCCTGTGAACCAACCCCAGAACACTCAGAAACCACTTACAACTTCCAGAGTGCCTTCTAGTCTTAATGATGTTGATGGCCCATCATGCTCAACCTCACTGTCAACTAATAACATCCAGATGTCCCCACCAAATCCACTGAAAAAAAACCAACATGTACCAGCCACATTAGGAGGGAGCTTGGTAGTTGAGCCCTCAAATAATCTGATACAAGAGCTTCAGGGTAAGTCTGACGTCCAGATCAAACATGAGCTTCCAAATGTGAAAGGACCGGACCAGCTAAGGTATAAAGGGACAATTATTGATCAACTGGAAGCTTCCTCTTCTGGAACATCTTACTGTCTTGATCCTGCTAACGCCCAGCAGAGCTTCTCTCTTCCCAACTTCTGCGTGGAAGGGGATGTACAATCACACCCTAGGAACAATCTACCATTTGCCCCTAATCTTGAAGGACTAACACCTGATACTTTATTCTCAAGGGGGTATGACTGTCAGAAAGATCTTCAAAACTTGCTCTCTAATTATGGCGGTGCTCCAGAAACTGAGCTATCCACTGCTGACATCAGCTCGCAGTCATTCGGGGTGCCAAACATACCTTTTAAATCTGGTTGCTCAAGCGACATTGCCATTAATGATACTGGGGTTTTGAATAATGGCTTGTGGACTAACCAAACTCAACGAATGCGAACATATACTAAGGTTCAAAAGCGTGGCTCTGTGGGAAGATGCATTGATGTTACTCGTTACAAGGGATACGATGATCTCAGACATGATTTGGCTCGTATGTTTGGGATTGAAGGGCAGCTGGATGATCCTCATAGGACTGACTGGAAACTGGTATATGTGGATCATGAAAACGACATTCTTCTTGTTGGTGATGACCCGTGGGAAGAATTTGTAAGCTGTGTCCAAAGCATAAAGATACTGTCATCCACTGAGGTGCAGCAAATGAGCTTGGATGGAGATTTAGGTAATGTTCCACTTTCCAATCAAGCTTGTAGTGGGACTGACAGTGGCAATGCGTGGAGGGGACAGTATGATGATACCTCTGCTGCTTCGTTTAATCGATAA 3342 0.4503 MPVSPSLLRLYFSISFHVVMKAPTNGYLPNSGEGERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADIVPSYPNLPSKLICMLHNVALHADIETDEVYAQMTLQPVNKYEKEAILASEMGLKQSRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDYSMQPPAQELVAKDLHDNTWTFKHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIRHAIRQQSALSSSVISSDSMHIGILAAAAHAAANNSPFTIFYNPRASPAEFVVPLAKYNKALYTQVSLGMRFRMMFETEESGVRRYMGTVTGISDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPVVTPFYICPPPFFRPKFPKQPGMPDDESDIENAFKRAMPWLGDDFSMKDASNSILPGLSLVQWMSMQQNSQLSAAQSGIFPSVLSSNSMHNNLSTDDPAKLLSFQSPVLSSQSIQFNKSNLPNQVNQLQQSPASWTQQQQQLQPLSQTPVNQLQQQRQQQPELQNLPPQQQLQQQQQSQHQQQQQHAVMNNGIVASSRILSQSVQQPVSYSQLQQQQMLSGNIPPQQSIQPTSKNIFPLPSLPQDSQFQQQIDQQACLLQRQQQQTQFQQPPMQLLQQNLSQRPPQQLQATQLSQQNLSEQQLQLQLLQKLQQQQQQLLPSSSPLLQPPLVQQQNANQQNQQLPQMPVSQHQPQQLSNTAFSTEKLLNSNGFSSSALMQSQQLPVNQPQNTQKPLTTSRVPSSLNDVDGPSCSTSLSTNNIQMSPPNPLKKNQHVPATLGGSLVVEPSNNLIQELQGKSDVQIKHELPNVKGPDQLRYKGTIIDQLEASSSGTSYCLDPANAQQSFSLPNFCVEGDVQSHPRNNLPFAPNLEGLTPDTLFSRGYDCQKDLQNLLSNYGGAPETELSTADISSQSFGVPNIPFKSGCSSDIAINDTGVLNNGLWTNQTQRMRTYTKVQKRGSVGRCIDVTRYKGYDDLRHDLARMFGIEGQLDDPHRTDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSTEVQQMSLDGDLGNVPLSNQACSGTDSGNAWRGQYDDTSAASFNR 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0581 1113 ProSiteProfiles B3 DNA-binding domain profile. 145 247 IPR003340 GO:0003677
Bisa02g0581 1113 Gene3D - 142 247 IPR015300 -
Bisa02g0581 1113 MobiDBLite consensus disorder prediction 708 731 - -
Bisa02g0581 1113 MobiDBLite consensus disorder prediction 590 620 - -
Bisa02g0581 1113 MobiDBLite consensus disorder prediction 501 562 - -
Bisa02g0581 1113 FunFam Auxin response factor 143 247 - -
Bisa02g0581 1113 Pfam B3 DNA binding domain 145 245 IPR003340 GO:0003677
Bisa02g0581 1113 FunFam Auxin response factor 308 380 - -
Bisa02g0581 1113 Pfam Auxin response factor 271 353 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bisa02g0581 1113 SUPERFAMILY CAD & PB1 domains 999 1064 - -
Bisa02g0581 1113 ProSiteProfiles PB1 domain profile. 986 1079 IPR000270 GO:0005515
Bisa02g0581 1113 SMART B3_2 145 247 IPR003340 GO:0003677
Bisa02g0581 1113 Pfam AUX/IAA family 983 1072 IPR033389 -
Bisa02g0581 1113 Gene3D - 981 1075 - -
Bisa02g0581 1113 FunFam Auxin response factor 981 1075 - -
Bisa02g0581 1113 CDD B3_DNA 144 236 IPR003340 GO:0003677
Bisa02g0581 1113 SUPERFAMILY DNA-binding pseudobarrel domain 135 274 IPR015300 -
Bisa02g0581 1113 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 35 571 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bisa02g0581 1113 MobiDBLite consensus disorder prediction 758 788 - -
Bisa02g0581 1113 Gene3D - 308 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0581 Bisa-ChrBisa02 10048584 10057462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0581 20 1113 B3 DNA Binding Superfamily AT1G19220 63.134 0.0 1226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bisa02g0581 AUX_IAA 6.6e-09 CL0072