LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa02g0574	ATGGCCGCTGTTCGCTCCTCCTTCGCCTTCCTCTTCCTCCCGCTCTTCCTCCTCACCCTCTCCTTCTCCCCCACCGCACTCTCCAACCCCGACGAGGACGCCCTCCTCCAGTTCAAGCTCTCACTCGACCCCGTCGCCGCAGCCGGCCCCCTCGCCAACTGGCTCCCCTCCACCCTCGCTTGTGCCCAACCTGTCTGGAGGGGTGTCCTCTGCAACAAGAACCAGGTCACCGGCATCCACCTCGACAGCATGCGCCTCTCCGGCGAGATCGACGTCGACGCCCTACTCCGCCTCCCCGGCCTCCGCATCATCGCCCTCGAGAACAACTCCTTCTCCGGCCCCATCCCCCCCTTCAACAAGCTTGCCTCTCTCAAGACTCTCGTCCTGAACGCCAACCAGTTCTCCGGCCCCATCCCTCCCGACTACTTCGCCAACCTTGGCAACATCAAGAAGATCTGGCTCTCCAATAACAAGTTCTCCGGAGAAATCCCAAACTCCTTGAGCAAGATCAAGCTGCTCATCGAACTCCACCTCGAGAACAATGAGTTCACCGGGCCCGTCCCTCCCCTCAGCGAACTCATGAATAACCTCAACGTCTCCAATAACAAACTCCAAGGACAAATCCCCGAGAATCTCGCTAAATTCGGCCCCAATGCCTTCGCGGGCAATCCGGGCCTCTGCGGGAAACCATCGGATAATACGTGTCCGGAGACGAAGCCAGAAGGGGAAGCCATAGCTAGTGACAACAACAACAACAGGTCGCAGAAGAAAGATGGTGCGAGTTGGGTGATGGTGTTAATCGTAGTGCTGGCGGTTATAGTGGTGGTGTTGATAATCTTAGTGGTGCTACGTTATGTGAAGAATCGAAACGATGAGGGAGCGGGAAGAGGAATCAGTGCACGTGGTGGTAAGGAAGAGGTGGTGCAGGTCCACGTGTCCGGCTCCAACCATAGCAGAACCTCCAGAACCTCCAGCAAGAAGTCCGGTGACTCCAGGAGAGGCGGTGCCGCTGGTGGCAAACGTAGCGCCATTGGCGACATCATCATGGTCAACACGGATAAGGGCACCTTCGGCCTCCCCGACCTCATGAAGGCTGCCGCCGAGGTCCTCGGCAACGGTGGCATGGGCTCCGCCTATAAAGCCACCATGACCGGCGGCCTCTCAGTCGTCGTCAAGCGAGTCCGGGAGATCAACAAAATCGGCCGAGATGACTTCGATGCCCAAATGCGACGCTTCGGTGCCTTCGAACATCCCAATATCCTCCACCCCCTCGCTTACCATTATCGCAAAGAGGAGAAGCTCATCGTCTCCCAATACGTTCCCAAGGGCAGCCTCTTGTATGTCTTGCACGGGGACAGAGGAATCTGCCATGCGGATTTGAACTGGGCAACGCGTTTGAAGATTGTGAAGGGAATCGCAGCAGGGTTGAGCTTTCTGCATTCGCAATTCGAAAGCTTCGATCTCCCCCATGGAAACCTCAAGTCCAGCAACATTCTGTTGAATGAAAATTACGAGCCGCTCCTCAACGACTATGCCTTCCATCCCTTGATCAACCCTAACAGTGCTCCCCAGGCCCTGTTCGCCTACAAATCCCCAGACTACGTGCAGTACCAGCAAGTGACTCGCAAGACCGACGTGTACTGCCTCGGCATCATCATCCTCGAAATCTTGACCAGCAAATTCCCCTCTCAGTATCACAGCAACGGCAAGGGCGGCACCGACGTCGTGCAGTGGGTGCTCACCGCCATCTCCGACGGAAGAGAGGCCGAGTTGATCGATCCCGAGATTAAGAACAACGCTACCACTGAATCAGTCGACCACATGCTGCAACTTCTCCAAATTGGGGCTAGTTGCACGGAGTCCAATCCCGAACAACGACTTACCCTCGGGGACGCCATTAAGAGGATAGAGGAGGTACAAGCTTGA	1926	0.5649	MAAVRSSFAFLFLPLFLLTLSFSPTALSNPDEDALLQFKLSLDPVAAAGPLANWLPSTLACAQPVWRGVLCNKNQVTGIHLDSMRLSGEIDVDALLRLPGLRIIALENNSFSGPIPPFNKLASLKTLVLNANQFSGPIPPDYFANLGNIKKIWLSNNKFSGEIPNSLSKIKLLIELHLENNEFTGPVPPLSELMNNLNVSNNKLQGQIPENLAKFGPNAFAGNPGLCGKPSDNTCPETKPEGEAIASDNNNNRSQKKDGASWVMVLIVVLAVIVVVLIILVVLRYVKNRNDEGAGRGISARGGKEEVVQVHVSGSNHSRTSRTSSKKSGDSRRGGAAGGKRSAIGDIIMVNTDKGTFGLPDLMKAAAEVLGNGGMGSAYKATMTGGLSVVVKRVREINKIGRDDFDAQMRRFGAFEHPNILHPLAYHYRKEEKLIVSQYVPKGSLLYVLHGDRGICHADLNWATRLKIVKGIAAGLSFLHSQFESFDLPHGNLKSSNILLNENYEPLLNDYAFHPLINPNSAPQALFAYKSPDYVQYQQVTRKTDVYCLGIIILEILTSKFPSQYHSNGKGGTDVVQWVLTAISDGREAELIDPEIKNNATTESVDHMLQLLQIGASCTESNPEQRLTLGDAIKRIEEVQA	641

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa02g0574	641	Gene3D	Ribonuclease Inhibitor	193	238	IPR032675	-
	Bisa02g0574	641	MobiDBLite	consensus disorder prediction	231	255	-	-
	Bisa02g0574	641	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	15	640	IPR046959	-
	Bisa02g0574	641	SUPERFAMILY	Protein kinase-like (PK-like)	368	636	IPR011009	-
	Bisa02g0574	641	Pfam	Leucine rich repeat	123	182	IPR001611	GO:0005515
	Bisa02g0574	641	ProSiteProfiles	Protein kinase domain profile.	364	641	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa02g0574	641	Pfam	Leucine rich repeat N-terminal domain	29	72	IPR013210	-
	Bisa02g0574	641	Gene3D	Phosphorylase Kinase; domain 1	340	439	-	-
	Bisa02g0574	641	MobiDBLite	consensus disorder prediction	309	340	-	-
	Bisa02g0574	641	Gene3D	Ribonuclease Inhibitor	28	192	IPR032675	-
	Bisa02g0574	641	Gene3D	Transferase(Phosphotransferase) domain 1	440	641	-	-
	Bisa02g0574	641	FunFam	Nuclear pore complex protein NUP107	28	189	-	-
	Bisa02g0574	641	ProSitePatterns	Protein kinases ATP-binding region signature.	370	392	IPR017441	GO:0005524
	Bisa02g0574	641	Pfam	Protein kinase domain	368	633	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa02g0574	641	SUPERFAMILY	L domain-like	49	215	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa02g0574	Bisa-ChrBisa02	9936457	9938494	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa02g0574	9	639	Receptor kinase-like Gene Family	AT3G42880	48.758	0.0	612

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Bisa02g0574		Pkinase	3.6e-25	CL0016