Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0562 ATGACTGTGATGAAACTCACATGGAAATCCATCTTCCCCAGCTGCTACAAGGGCGAATACCCTTGCGAAAAGCCCGAGCAGGAGGTGCGTCAAGCCGAAGCCACAGTCACAGCCACTAAGAAAAGCTCTTCGCACAGGATTTCTGTAACGGATTTGAGTAATCCCAGCATGACGCTTACGGAGGATCTATCGGTTTCTCTTGCGGGATCTAATCTCCACGTCTTCACACTCGCTGAGCTCAAGATCATTACTAACAGTTTCTCTTCCAGTAACTTTCTCGGAGAAGGCGGGTTCGGACCCGTCCACAAGGGCTTCATCGATGACAATCTCAGGCCCGGGCTCGAGCCTCAACCCGTCGCTGTTAAGCTCTTGGACCTCGATGGCTCCCAGGGCCATATGGAGTGGTTGACGGAGGTTGTTTTTCTGGGGCAACTGAGGCATCCACACCTTGTGAAGCTCATAGGGTATTGCTGTGAAGAAGAACACAGGCTTCTGGTTTATGAGTATCTACCCAGAGGCAGTTTGGAGAATCAACTATTTAGAAGATATTCGGCATCACTACCATGGTCATCGAGAATGAAGATTGCTGTGGGAGCCGCAAAGGGTCTAGCCTTTCTTCACGAAGCAGAGAAACCGGTCATATATAGAGATTTCAAAGCTTCTAACATCCTATTGGATTCGGATTACAATGCAAAACTCTCGGATTTTGGGCTGGCAAAAGATGGTCCTGAAGGGGATGACACCCACGTTTCAACCAGAGTTATGGGGACACAAGGGTATGCTGCCCCAGAATATGTGATGACAGGTCACTTGACATCAATGAGTGACGTGTATAGCTTTGGAGTGGTTCTGTTGGAGATGCTGACAGGGAGGAGGTCAGTGGACAAGAGCAGGCCAGGGAGAGAGCAGAACTTAGTGGAATGGGCAAGGCCATTGTTGAATGATCCCAGAAAACTTGGGAGGATTATGGATCCCAGACTTGAAGGTCAGTATTCTGAGATGGGAGCAAGAAAAGCTGCTGCTTTGGCTTATCAATGCCTCAGCCACAGACCCAGAAGCAGACCTTCCATGAGTACTGTGGTTAAGACCTTGGAACCCCTCCAGCACTTTGATGATCTTCCCATTGGACCCTTTGTTTACACTGTCCCAACTGATCCTGAACCCCAACCATCTGACCCCCCCAAAGAAAGAAAGAAAGACAATGGCCACCACCACCGGAAGCACCATCACCACCATGCTCATAACCCCACCTCACAAACTTAG 1263 0.4941 MTVMKLTWKSIFPSCYKGEYPCEKPEQEVRQAEATVTATKKSSSHRISVTDLSNPSMTLTEDLSVSLAGSNLHVFTLAELKIITNSFSSSNFLGEGGFGPVHKGFIDDNLRPGLEPQPVAVKLLDLDGSQGHMEWLTEVVFLGQLRHPHLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFRRYSASLPWSSRMKIAVGAAKGLAFLHEAEKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSMSDVYSFGVVLLEMLTGRRSVDKSRPGREQNLVEWARPLLNDPRKLGRIMDPRLEGQYSEMGARKAAALAYQCLSHRPRSRPSMSTVVKTLEPLQHFDDLPIGPFVYTVPTDPEPQPSDPPKERKKDNGHHHRKHHHHHAHNPTSQT 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0562 420 ProSiteProfiles Protein kinase domain profile. 87 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0562 420 SUPERFAMILY Protein kinase-like (PK-like) 72 392 IPR011009 -
Bisa02g0562 420 Gene3D Transferase(Phosphotransferase) domain 1 170 373 - -
Bisa02g0562 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Bisa02g0562 420 MobiDBLite consensus disorder prediction 400 420 - -
Bisa02g0562 420 PANTHER OS01G0588500 PROTEIN-RELATED 45 368 - -
Bisa02g0562 420 Pfam Protein tyrosine and serine/threonine kinase 91 364 IPR001245 GO:0004672|GO:0006468
Bisa02g0562 420 FunFam Probable serine/threonine-protein kinase PBL8 170 378 - -
Bisa02g0562 420 CDD STKc_IRAK 93 367 - -
Bisa02g0562 420 MobiDBLite consensus disorder prediction 378 420 - -
Bisa02g0562 420 Gene3D Phosphorylase Kinase; domain 1 47 169 - -
Bisa02g0562 420 FunFam Serine/threonine-protein kinase BIK1 54 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0562 Bisa-ChrBisa02 9741518 9743137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0562 14 392 Glycoside Hydrolase AT3G07070 45.736 4.10e-103 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bisa02g0562 PK_Tyr_Ser-Thr 2.4e-45 CL0016