Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0554 ATGATGAACACAAGGAACAAGTTCCCCTTTACTCCATCCCAGTGGCAAGAGCTTGAACATCAAGCTCTTATTTTCAAGTACATGGCTTCTGGTATCCCCATCCCTCCAGATCTTCTCTTCACTATCAGAAGGAGCTACTTGGACTCTCCTCTCTCTTCAAGGCTTCTCTCTCACCAACCTCAACACTTTGGGTGGAACTATTTGCAGATGGGTTTGGGGAGAAAAATAGACCCAGAGCCAGGGAGATGCAGAAGAACTGATGGGAAGAAATGGAGATGCTCGAAAGAGGCATACCCAGATTCAAAATACTGTGAGAGACACATGCACAGAGGAAAAAACCGTTCAAGAAAGCCTGTGGAAGTTCTCAAAACAACACCATCACACACTGATCCTTTATCAGTCAACAAAGATGGCCCTTCACTCCCTCTAACCCCAACCACTCATTCTTTCTCTGAAACCTTCCAATACCATCACCCTCCAAATTCTTTCTATGCTTCCCATCTTCAGCCCCACTCCTTCCTTTATCATCATCCTCCTTCTTCAAGGCCATTCCAAGATAATAACAATAGTGCTCCCTCGTTTCTTGACACTCAGAGTGACACTGACTTCAGGTATGTTTATGAATTGAAAGGGGAGGTGGACGAGCACGCTTTCTTCACAGAACCTTCTGGGAGTATGAGGAGCTTCTCTGTTTCACCTATGGATGACTTCACTTCGCTGAGGAGTTCCTCATCGAAACACAGGAATGGCTCTGCCTCTGCCTCTGCTTTATCCGATGACTACTCGTACTTGCAGCTTCAGAGCCTCAGTGACAATGCAAAAGGAGCAGAAGCAGAGCAAGGCCAGAGTTGCTATATATTGGGCAGTGATCTCAAGTGTGAAACGCCCATGAAACTGGAAAAACAAGAACCTCAGAAGATCGTTCACCGCTTCTTCGATGAATGGCCCCCCAAAAGCCGAGACTCTTCGTGGCTTGATTTGGATGACAAATCATCCACAACCCAACTCTCCATTTCCATTCCCACCTCTGATCAAGATTTTCCGGCTTTCAATTCCAGAACCCATCAAGGTTAA 1074 0.4609 MMNTRNKFPFTPSQWQELEHQALIFKYMASGIPIPPDLLFTIRRSYLDSPLSSRLLSHQPQHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTTPSHTDPLSVNKDGPSLPLTPTTHSFSETFQYHHPPNSFYASHLQPHSFLYHHPPSSRPFQDNNNSAPSFLDTQSDTDFRYVYELKGEVDEHAFFTEPSGSMRSFSVSPMDDFTSLRSSSSKHRNGSASASALSDDYSYLQLQSLSDNAKGAEAEQGQSCYILGSDLKCETPMKLEKQEPQKIVHRFFDEWPPKSRDSSWLDLDDKSSTTQLSISIPTSDQDFPAFNSRTHQG 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0554 357 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bisa02g0554 357 ProSiteProfiles WRC domain profile. 77 121 IPR014977 -
Bisa02g0554 357 MobiDBLite consensus disorder prediction 124 140 - -
Bisa02g0554 357 MobiDBLite consensus disorder prediction 108 140 - -
Bisa02g0554 357 MobiDBLite consensus disorder prediction 335 357 - -
Bisa02g0554 357 Pfam QLQ 9 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bisa02g0554 357 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bisa02g0554 357 PANTHER GROWTH-REGULATING FACTOR 5 8 344 IPR031137 GO:0005634|GO:0006351|GO:0032502
Bisa02g0554 357 Pfam WRC 78 120 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0554 Bisa-ChrBisa02 9589597 9590875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0554 9 120 GRF Transcription Factor Family AT3G13960 73.214 5.90e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Bisa02g0554 WRC 7.4e-21 No_clan