Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0548 ATGGAGACTAGTTTGATGTCACACTTCAATCGTTTCAGACGTTTGGCCAATTCATTCCTATCGCAATACGAACCTATTGTTCTGCTAGTCTCTCCTCTCGTTGCTCTCCTTCTCGCCCACTCAATTCGATCGTTTTTTGAGCTCGTTCATGATAAAGGACTTAAACCTACTCTACTAGGGTTTCTCATGAGCTCTATCAAATTGATCCCGGGTGTGAAGAGTTACATCAATGCTCAAAAACAGAAGGTTGTGGATAAGTTGCAGTCTGACAGTAAATCTAAAAAAGAAGGTTGGAGAGCGGAGTTGCCAACGGCAGGACTAGGGATGGAAATTCTTGGGAAAATGAGAGAAGAGAAAAGAAACGATGTGATGTGGCAGGGCAAATGCTCTGGTACAGTCTACATTGGAGGAAGTGAATTTGATGAACACTTCTCTTTGATAAATGAGGCATGCTCAATGTTTGCACATACCAATCCCTTGCATTTGGATGTATTTAAGAGTGTTGCACGCTTTGAGGCTGAAGTGGTTGCAATGACAGCTGCACTTCTTGGAATTAAGGAAAAGAGTTCTGGGGGACAAATATGTGGAAATATGACTTCGGGAGGGACTGAAAGTATACTATTGGCTGTCAAATCATCTCGTGACTATATGAAGTCTAAGAAAGGAATTACAAGACCTGAAATGATAATACCTGAGTCTGCACACTCAGCATATGACAAGGCTGCACAGTATTTTAATATTAAACTCTGGCGCATCCCAGTTAACAAAAGATTTCAAGCAGATTCAAAAGCAATTCGACAGCATATTAATAAAAATACCATCTTGATTGTTGGCTCTGCCCCTGGGTTTCCTCATGGAATAATTGATCCCATTGAAGAACTTGGTGATCTGGCATCGAGCTATGGAATTTGTTTTCATGTTGACCTTTGTCTTGGTGGCTTTGTATTACCATTTGCTCGCAGTCTTGGGTACCCCATTCCACCTTTTGACTTTTCTGTCAAAGGAGTTTCTTCAATATCAGTGGATGTGCATAAATATGGTTTAGCTCCCAAAGGAACAATTACTGAGTGGTCTGGTGGGTTGTATGTGTCTCCAACCATGGCTGGAAGCAGGCCTGGAGGTCTTATTGCTGGGGCTTGGGCAGCAATGATGTCTTTAGGGCAAGAAGGTTACTTGCAGAATACAAAAGCAATTATGGATGTTTCAAAAAGAATACAGGAAGGCATAGGAGAGATTCCTGAATTGTTCATCGTTGGAAGACCAGACATGACAATTGTGGCGTTTGGATCTGATGTTCTGGACATATTTGAAGTCAATGATATCATGTCATCCAGAGGGTGGCATTTGAATGCATTACAGAGACCTAACAGCATCCATATCTGTGTGACACTGCAGCATGTGGCAATTGTTGAAGACTTCCTCAGGGATTTAAAGGAATCTGTGAAAACTGTGAAAGAAAATCCAGGTCCAATAAGTGGAGGGTTGGCACCTATATATGGTGCCGCAGGAAAGATGCCAGATAGAGGTATGGTCCAGGAATTGTTGGTAGATTACATGGACGGTACCTGCTAA 1572 0.4205 METSLMSHFNRFRRLANSFLSQYEPIVLLVSPLVALLLAHSIRSFFELVHDKGLKPTLLGFLMSSIKLIPGVKSYINAQKQKVVDKLQSDSKSKKEGWRAELPTAGLGMEILGKMREEKRNDVMWQGKCSGTVYIGGSEFDEHFSLINEACSMFAHTNPLHLDVFKSVARFEAEVVAMTAALLGIKEKSSGGQICGNMTSGGTESILLAVKSSRDYMKSKKGITRPEMIIPESAHSAYDKAAQYFNIKLWRIPVNKRFQADSKAIRQHINKNTILIVGSAPGFPHGIIDPIEELGDLASSYGICFHVDLCLGGFVLPFARSLGYPIPPFDFSVKGVSSISVDVHKYGLAPKGTITEWSGGLYVSPTMAGSRPGGLIAGAWAAMMSLGQEGYLQNTKAIMDVSKRIQEGIGEIPELFIVGRPDMTIVAFGSDVLDIFEVNDIMSSRGWHLNALQRPNSIHICVTLQHVAIVEDFLRDLKESVKTVKENPGPISGGLAPIYGAAGKMPDRGMVQELLVDYMDGTC 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0548 523 FunFam Sphingosine-1-phosphate lyase 1 483 522 - -
Bisa02g0548 523 PANTHER - 40 523 - -
Bisa02g0548 523 FunFam Sphingosine-1-phosphate lyase 1 374 486 - -
Bisa02g0548 523 Gene3D - 475 522 - -
Bisa02g0548 523 FunFam sphingosine-1-phosphate lyase 1 140 387 - -
Bisa02g0548 523 Gene3D Aspartate Aminotransferase, domain 1 110 474 IPR015422 GO:0003824
Bisa02g0548 523 SUPERFAMILY PLP-dependent transferases 77 486 IPR015424 -
Bisa02g0548 523 Pfam Pyridoxal-dependent decarboxylase conserved domain 149 351 IPR002129 GO:0016830|GO:0019752|GO:0030170
Bisa02g0548 523 Gene3D - 144 390 IPR015421 GO:0003824
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0548 156 483 Calmodulin-binding Proteins AT3G17760 25.683 1.29e-20 93.2