Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0546 ATGTACCGCCTGAAAGACGAGACGCAGCCTTACCAATACCGAAAGAGGCAAGTGCTGTTTAGCTCTTCGTCAATGGCGGCCGCATTTACAACCCTGTCAAATGTCGGGTCGTTGCCGAGTCCGCGAAGCGGCACCCAGATGAGAGTTTTGTACCCTATGGCTATGAGAAGTGCTAGTTCAGTGAAGCTCGCGGGATTTTATTCGCGGTCGAATATATGCTCCTCATCGAGCGCCTTCGCGGGTTCGCTGCGTTTGGAGCCTTCCACTTCTTGGGATGCTTCATCCCGTGAAAGAACGCGTTTCTCCAACTTGATCCGGGCCAGTTCTGTGGAAGCACCTTTACAATCAAAAGTTACTCACAAGGTATATTTTGACATAAGCGTTGGAAATCCAGTGGGGAAGCTTTCTGGAAGGATTGTGATTGGACTCTTTGGTGATGATGTGCCCCAAACAGCAGAGAACTTCCGTGCCCTTTGTACAGGAGAGAAGGGCTTTGGGTACAAAGGTTCTACGTTCCACCGTGTAATAAAGGATTTCATGATTCAAGGAGGGGACTTTGACAAAGGGAATGGAACTGGAGGAAAAAGTATTTACGGACGCACATTCAAAGATGAAAATTTCAAGTTGTCTCATGTGGGACCGGGAGTTGTTAGCATGGCAAATGCAGGCCCCAACACCAATGGGAGTCAGTTCTTTATATGCACTGTCAAGACACCATGGCTGGATCAGAGGCATGTTGTATTTGGCCAAGTTTTGGAAGGCATGGACACTGTTAGGTTAATTGAGTCACAGGAGACAGATCGAGGTGACCGTCCAAGGAAGAAGGTAACAATCTTTGACTGTGGTGAGCTTCCAGTTGCATGA 864 0.4815 MYRLKDETQPYQYRKRQVLFSSSSMAAAFTTLSNVGSLPSPRSGTQMRVLYPMAMRSASSVKLAGFYSRSNICSSSSAFAGSLRLEPSTSWDASSRERTRFSNLIRASSVEAPLQSKVTHKVYFDISVGNPVGKLSGRIVIGLFGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHVGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDTVRLIESQETDRGDRPRKKVTIFDCGELPVA 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0546 287 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 167 184 IPR020892 GO:0003755|GO:0006457
Bisa02g0546 287 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 137 283 IPR002130 GO:0000413|GO:0003755
Bisa02g0546 287 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 136 282 IPR002130 GO:0000413|GO:0003755
Bisa02g0546 287 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 172 184 IPR002130 GO:0000413|GO:0003755
Bisa02g0546 287 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 143 158 IPR002130 GO:0000413|GO:0003755
Bisa02g0546 287 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 230 242 IPR002130 GO:0000413|GO:0003755
Bisa02g0546 287 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 215 230 IPR002130 GO:0000413|GO:0003755
Bisa02g0546 287 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 243 258 IPR002130 GO:0000413|GO:0003755
Bisa02g0546 287 CDD cyclophilin_ABH_like 120 282 - -
Bisa02g0546 287 Gene3D - 107 287 IPR029000 -
Bisa02g0546 287 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 121 284 - -
Bisa02g0546 287 FunFam Peptidyl-prolyl cis-trans isomerase 108 287 - -
Bisa02g0546 287 SUPERFAMILY Cyclophilin-like 113 284 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0546 Bisa-ChrBisa02 9453114 9456952 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0546 137 281 U-box Gene Family AT5G67530 48.630 1.25e-35 132