Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0529 ATGGCTTCACCATCTGAACTAAGCCTGGATTGCAAACCCCAAAGCTATTCCATGCTTCTGAAATCTTTTGGAGATCAGACAGATCATACCTACAAGCTTGAAGAGTTCCTTTCTCGACTAGAGGGTGAACGTCTCAAGATTGATGCCTTCAAGCGCGAGCTTCCTCTCTGCATGCAGCTTCTTGCCAACGCTATGGAGGCTTCAAGGCAGCAACTTCAGGCCTTCAGAGCAAATCAAGGTACGGGGCCAGTACTGGAAGAATTCATACCCATCAAGCATTCAACCTCTGAAAGCTCTGAGAAGACATCAAACTTATCGGACAAGGCAAATTGGATGACATCTGCTCAGTTATGGAGCCAAGCAAATGAGGGAACCAAGCCAACAATTAAATCACCTAAAGATGCTGATAATATTGGTTTCAGTGTGAGCCCTAAGCTAGCTCTAGACAACAAACCGAGGAATGGTGGAGCCTTCCTTCCATTCTCAAGAGAACGAAATTCCACATGCCAAGGTGGTTCCACATTGCGGGTGATCCCCGAGTTGGCCCTTGCATCTGCTGAGAAAGAAATGGAGGATAAGAAATGTGCAGATGCAGATAATAATGGAATGTCGTGTCCAAAGAGAGAAAATTCTGGTAAAGCTGGAAGTAATGGCGGAGTGGTAACTGACCAAGTAAAAGGGGCTCCAGTTGCATCTGATCCACAAACCACCACCACCACCACCACCAACCAAACTCATAGGAAAGCAAGAAGGTGTTGGTCACCAGACCTGCATCGTCGTTTCGTGAATGCTCTTCATATGCTTGGTGGATCTCAAGTGGCCACCCCAAAACAAATAAGGGAGCTGATGAAGGTTGACGGTTTGACCAATGATGAAGTTAAAAGCCATCTCCAGAAATATAGGCTTCACACTAGACGACCCAGTCCAAGCCCACAAGCAGCCGGGTCACCCGCACCCCAGCTCGTAGTCCTAGGAGGAATCTGGGTCCCCCCGGACTACGCTACAGCAGCCGCCGCCGCAGCCCACACAGGCGCCCCTGCGCTCTACGGCCCACACCCTACGTCCCACGCGCCTCCACCGCACTACTGTACTGCTGCTCCAGTACACCAGGAATTCTACCCTGCCGCGCCGCAGCAACCGCCGCTGCCACCGCCACCTCATCACCACACCCTCCACCACCACCAACACCACCTCCACATGTACAAAACGAACCCGCACGAGAGCTCGCCGGAATCTGACATCCGAGGCTGCGGAGACAGGTCGGAGAGCATCGAGGATGGGAAATCAGAGAGCAGCAGCTGGAAAGGAGAGAGCGGGGAGAGAAAGGGGCTAGCGGCACTGAGAGAAGACGGCGAAGAGAGTAATGGGAGCGAGATCACTCTCAAATTCTAG 1392 0.5187 MASPSELSLDCKPQSYSMLLKSFGDQTDHTYKLEEFLSRLEGERLKIDAFKRELPLCMQLLANAMEASRQQLQAFRANQGTGPVLEEFIPIKHSTSESSEKTSNLSDKANWMTSAQLWSQANEGTKPTIKSPKDADNIGFSVSPKLALDNKPRNGGAFLPFSRERNSTCQGGSTLRVIPELALASAEKEMEDKKCADADNNGMSCPKRENSGKAGSNGGVVTDQVKGAPVASDPQTTTTTTTNQTHRKARRCWSPDLHRRFVNALHMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPQAAGSPAPQLVVLGGIWVPPDYATAAAAAAHTGAPALYGPHPTSHAPPPHYCTAAPVHQEFYPAAPQQPPLPPPPHHHTLHHHQHHLHMYKTNPHESSPESDIRGCGDRSESIEDGKSESSSWKGESGERKGLAALREDGEESNGSEITLKF 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0529 463 Pfam Myb-like DNA-binding domain 250 301 IPR001005 -
Bisa02g0529 463 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 20 435 IPR044787 GO:0003700|GO:0006355
Bisa02g0529 463 Coils Coil 33 53 - -
Bisa02g0529 463 Gene3D - 247 305 - -
Bisa02g0529 463 MobiDBLite consensus disorder prediction 374 463 - -
Bisa02g0529 463 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 245 305 IPR017930 -
Bisa02g0529 463 MobiDBLite consensus disorder prediction 401 457 - -
Bisa02g0529 463 MobiDBLite consensus disorder prediction 197 250 - -
Bisa02g0529 463 MobiDBLite consensus disorder prediction 229 248 - -
Bisa02g0529 463 SUPERFAMILY Homeodomain-like 245 306 IPR009057 -
Bisa02g0529 463 MobiDBLite consensus disorder prediction 204 218 - -
Bisa02g0529 463 FunFam Myb family transcription factor 247 305 - -
Bisa02g0529 463 NCBIfam myb-like DNA-binding domain, SHAQKYF class 248 303 IPR006447 GO:0003677
Bisa02g0529 463 Coils Coil 58 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0529 Bisa-ChrBisa02 9199454 9201718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0529 1 463 G2-like Transcription Factor Family AT2G03500 51.012 5.62e-131 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa02g0529 Myb_DNA-binding 4e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2274 08 54069371 54073164 Bisa02g0529 02 9199454 9201718 CCT
Bisa02g0529 02 9199454 9201718 Bisa02g0529 02 9199454 9201718 ECH