Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0526 ATGAAGGACCCAGAAGAAGATCAAGTGACATCCAGAAGGCCTTTTCAGAAATCTACAGATCGTAGAAGAAGAGGTAGGAGAAGAAGCCATTGCAAACCAGACATATTACAAGAAAAAGGGATTGATTTGGAACTGAATCCCTCTGCTTCTGCTTGCAAGAGTCTTGTGTTCCACCGCAGGCCTGGCCATGGCCAGCTTGGGACCAAGTGTGTGGTCAAAGCCAACCACTTTCTCGCAGATGTATCAGCATCAGACTTGAGCCATTACAGTGTTAAGATAACACCTGAAGTTACTTCTCGTAAAATAAGCAAAGCTATCATAGCTCAGTTGGTGAGGCTTCACAGAAACACAGACTTGGGCTCGAGACTTCCGGTTTATGACGGAGGAAGGAATCTTTACACTGCTGGCTTACTTCCTTTCACACTCAAAGAGTTTACCATAATACTGAGTGAAGATGATGAGGGTACTGGTATTACCAGGGAAAGAGAATTTAGAGTGAGAATCAAGTTTGCTGCCCGTGTTAGCATGCATCAACTACGCGAGCTTCTTAGTGGGAAACAGGTGGACACCCCACAAGAAGCACTCAGCATCATTGATATTGTGTTAAGGGAGCTTGCGGCTCAGAGTTACGTATCAGTTGGAAGGTTTCTCTATTCTGCTGATATCAAAAAACCACAGCAGCTAGGTGGTGGCTTGGAATCATGGCGTGGCTTCTACCAGAGTATAAGGCCTACTCAGATGGGGCTGTCACTTAACATTGACATGTCATCAATGGCGTTTATTGAGCCACTTCCTGTCATTGATTTTGTTGCTCAAATTCTGGGAAAAGATGTGCATTCAAAACCGTTGTCTGATGCAGATCGCGTCAAGATAAAAAAAGCCTTAAGAGGCGTAAAAGTTGAAGTTACACATAGAGGAAATGTTCGAAGGAAGTACAGGATTTCAGGACTGACATCACAGCCTACAAGGGAGCTTATATTTCCTCTTGATGAGCAAATGAACATGAAATCAGTTGTTGATTATTTTCGAGAGATGTATGGATATACAATTAAGTATTCACATCTACCATGCTTGCAAGTAGGGAATGAAAAGAAGGTGAACTATTTGCCCATGGAGGCATGCAAGATAGTTGGAGGCCAGAGATATACGAAAGGACTAAATGAAAAGCAGATAACTTCTCTGCTTAAGGTTTCATGCCAGAGACCCCGCGAACAAGAGCTAGACATTCTACAGACAATTCAACAAAATGATTATGAGCATAATCCCTATGCGAAGGAGTTTGGTATCAGCATAGATGACAAACTTGCATCAGTTGAGGCTCGGGTTCTGCCTGCTCCATGGTTGAAATATAACGATACTGGAAGAGAGAAAGAGTACTTGCCACAAGTTGGTCAGTGGAATATGATGAATAAGAAAGTTATAAATGGAAGCACTGTAAGATATTGGGCATGCATCAATTTCTCACGAAGTGTCCAGGAAAGTACAGCTCGTGGTTTTTGCCAACAGTTGGTTCAGATGTGTCAAATCTCAGGCATGGAATTCAGTCAGGACCCAGTGGTTCCTATATATTCAGCAAGACCAGATCAGGTAAAAAGGGCCCTCAAGTACGTTCACTGTGCTGCTTTAGACAAACTTGGGGGTAAAGAGCTAGAGTTGCTTATTGCTATTCTTCCAGACAATAATGGCTCTCTGTATGGTGATCTCAAAAGGATATGTGAGACAGATCTGGGGTTGATTTCTCAGTGCTGCCTCACAAAACATGTGTTCAAGATTAATAGACAGTACCTGGCAAATGTGGCACTTAAAATCAATGTCAAGATGGGAGGAAGAAACACAGTACTTTTGGATGCTTTAAGCTGGAGAATTCCATTGGTTAGTGACATTCCAACAATAATATTTGGAGCTGATGTAACTCATCCGGAATCTGGAGAGGATTCTTCTCCATCCATTGCTGCTGTTGTAGCCTCCCAGGACTGGCCTGAAGTAACAAAGTATGCAGGACTTGTGTGTGCTCAGCCTCATCGTGAAGAACTCATTCAAGACCTCTTCAAATGTTGGAAAGATCCTCAGCGTGGAGTAGTTTATGGTGGTATGATCAGAGAGCTCTTACTCTCATTTAAGAAGGCAACCGGACAAAAACCACTGAGGATAATATTTTACAGGGATGGGGTAAGTGAAGGACAGTTTTACCAGGTTTTGCTGTATGAGCTCGATGCCATTCGTAAGGCCTGTGCATCTCTGGAACCTAGTTATCAACCTCCTGTGACATTTGTTGTGGTTCAAAAGCGGCATCACACTAGACTCTTCTCAAACAATCATGATGATAGAAACAGCACTGACAGGAGTGGCAACATCTTACCAGGTACTGTGGTGGATTCTAAGATCTGTCATCCTACTGAATTCGACTTCTATTTATGCAGTCATGCAGGAATACAGGGCACAAGTAGACCAGCTCACTACCATGTCCTGTGGGACGAGAACAAATTCACTGCAGATGAGATTCAATCTCTAACCAACAACTTATGCTACACGTATGCAAGATGTACACGATCTGTTTCTGTAGTTCCTCCAGCATACTATGCACATTTAGCAGCTTACAGAGCTCGGTTCTATATGGAACCTGATGTCCATGAGAACGGTAAAGCGAGAGGTGGAAGATCAAAAGATGGGTCAGTTCGGCCATTGCCAGCTTTGAAAGAGAAGGTGAAGAATGTAATGTTTTACTGTTGA 2730 0.4304 MKDPEEDQVTSRRPFQKSTDRRRRGRRRSHCKPDILQEKGIDLELNPSASACKSLVFHRRPGHGQLGTKCVVKANHFLADVSASDLSHYSVKITPEVTSRKISKAIIAQLVRLHRNTDLGSRLPVYDGGRNLYTAGLLPFTLKEFTIILSEDDEGTGITREREFRVRIKFAARVSMHQLRELLSGKQVDTPQEALSIIDIVLRELAAQSYVSVGRFLYSADIKKPQQLGGGLESWRGFYQSIRPTQMGLSLNIDMSSMAFIEPLPVIDFVAQILGKDVHSKPLSDADRVKIKKALRGVKVEVTHRGNVRRKYRISGLTSQPTRELIFPLDEQMNMKSVVDYFREMYGYTIKYSHLPCLQVGNEKKVNYLPMEACKIVGGQRYTKGLNEKQITSLLKVSCQRPREQELDILQTIQQNDYEHNPYAKEFGISIDDKLASVEARVLPAPWLKYNDTGREKEYLPQVGQWNMMNKKVINGSTVRYWACINFSRSVQESTARGFCQQLVQMCQISGMEFSQDPVVPIYSARPDQVKRALKYVHCAALDKLGGKELELLIAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKINRQYLANVALKINVKMGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHPESGEDSSPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKCWKDPQRGVVYGGMIRELLLSFKKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRHHTRLFSNNHDDRNSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYMEPDVHENGKARGGRSKDGSVRPLPALKEKVKNVMFYC 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0526 909 Gene3D - 442 615 - -
Bisa02g0526 909 Pfam Mid domain of argonaute 461 537 IPR032473 -
Bisa02g0526 909 Pfam Argonaute linker 1 domain 212 261 IPR014811 -
Bisa02g0526 909 CDD Piwi_ago-like 422 872 IPR045246 -
Bisa02g0526 909 FunFam Protein argonaute-2 257 383 - -
Bisa02g0526 909 Pfam Argonaute linker 2 domain 408 450 IPR032472 -
Bisa02g0526 909 ProSiteProfiles Piwi domain profile. 552 873 IPR003165 GO:0003676
Bisa02g0526 909 Pfam PAZ domain 268 394 IPR003100 GO:0005515
Bisa02g0526 909 SUPERFAMILY Ribonuclease H-like 541 874 IPR012337 -
Bisa02g0526 909 SUPERFAMILY PAZ domain 259 418 IPR036085 GO:0005515
Bisa02g0526 909 Gene3D paz domain 258 382 - -
Bisa02g0526 909 Pfam Piwi domain 553 872 IPR003165 GO:0003676
Bisa02g0526 909 CDD PAZ_argonaute_like 263 377 - -
Bisa02g0526 909 ProSiteProfiles PAZ domain profile. 264 378 IPR003100 GO:0005515
Bisa02g0526 909 MobiDBLite consensus disorder prediction 1 31 - -
Bisa02g0526 909 Pfam N-terminal domain of argonaute 68 202 IPR032474 -
Bisa02g0526 909 MobiDBLite consensus disorder prediction 1 16 - -
Bisa02g0526 909 FunFam Argonaute 10 442 615 - -
Bisa02g0526 909 Gene3D - 621 909 IPR036397 GO:0003676
Bisa02g0526 909 SMART PAZ_2_a_3 268 400 IPR003100 GO:0005515
Bisa02g0526 909 SMART DUF1785_2 211 263 IPR014811 -
Bisa02g0526 909 FunFam protein argonaute 10-like 621 909 - -
Bisa02g0526 909 SMART Piwi_a_2 552 873 IPR003165 GO:0003676
Bisa02g0526 909 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 57 874 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0526 Bisa-ChrBisa02 9138003 9143472 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0526 57 909 Eukaryotic Initiation Factors Gene Family AT5G43810 75.610 0.0 1404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g0526 02 9138003 9143472 Bisa02g0526 02 9138003 9143472 ECH