Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0509 ATGCATCAATCATCAATGTGTTGCCAACAAGAACTTGAACTAACATCAATGGATGCCACCCATTACAGTCTCTCTACTTATCCCATGTTACCTTCTCTTGGCTCCACAACTTCTCGCAGACTCACCCTCAGATCCTTCATTCTTTCTCCTTATCACCCTCGTTACAGGCTGTGGCAGAGGCTTCTTGTTCCTCTGGTGGTCTACACTGCATGGGTATCGCCATTCGAATTCGGTTTCCTTGATAAACCACACACTCTGCTTTCTGTTACAGACAATGTTGTGAATGGATTCTTCGCTGTGGATATCGTTCTCACCTTTTTCGTGGCCTACATTGACAAACTCGCCTACTCCTTGGTTGACGACCCGAGAAAGATTGCCTGGAGGTATGCGACTTCGTGGTTGGCCCTCGATGTCATCTCCATTATGCCTTCGGAGCTTGCTCGCGATATTTCCCCTCAGCCACTGAGATCATATGGATTGTTCAGCATGCTTCGCCTTTGGCGTCTTCGAAGAGTTAGTGCTCTGTTTTCTAGGTACACACACAAGGTTACTCTTTTTGCTGTTCACTGTGCTGGATGCTTCTATTACCGTATTGCAGCAAGTTATCGTGATCCTAGCAGGCCTTGGGTTGGGAAATCAAACGAAAACCTCTTTCAAGAGAGCGTCTGGGCACGATATGTGACATCTATGTACTGGTCTATTACTACTCTAACAACTGTCGGCTATGGAGACTTATATCCAGTGAATGCAATGGAGATGATCTATGACATCTTTTACATGCTCTTCAATCTGGGGTTAATGGCATATTTGATTGGTAATATGACCAACTTGAGGGATACTATGCAAGCTGCCTCAAACTTTGCCCGAAGGAATAAATTACCTGCTCGTCTGAAAGACCAGATGCTTGAATATATGTGTTTGAAGTCCAGAACAGACTCGGAGGGATTGCATCAGCAAGGGCTCCTTGACGATCTCCCTAAAGCCATCAGATCAAGCATTTCCCGTGATCTATTTTACTCTCTGGTGGATAAAGTCTACTTGTTTCGTGGGGTTTCAGACCACCTGCTTTTTCAACTGGTCTCAGAGATGAAAGCTGAGTATTTTCCTCCCAATGAAGATGTCCTCTTGCAGAACGAAACACCAACAGATTTTTATATAATAGTGGCTGGTACTGTGGTTGTAGGCGAGGCAAAAGCTGGTGATCTCTGTGGTGAGTTTGGGGTGCTTTGCTGTAGGCCACAACGCTTTACTGTTCGAACCAAGCAATTAAGCCTGCTACTGAGGCTGAACTGCACTACATTTTTTAATACTATTCAGGCCAATGTGGTAGATGGGAGCCTAATCATGAATAATTTCCTTCAGCATTTGAAAGAGCTTGAGGATCCTATTATGAAGGGAGCTTTAGTGGAGACAGAGAACTTGCTGGCGCTTGGAAGGATGAGCCTACCACTGAGTCTTTCCTTTTCAGCACTTAGAGGATATGACTTATTGTTGCATCAATTGTTGAAACGGGGATTGGACCCAAATGAATCCGATGACAAAAGAAGGACGGCTTTGCATATAGCAGCATCTAAAGGAAGTGTGGGCTGTGTCATGCTTCTGTTGGATTATGGAGCAGATCCCAACGTTAGAGATTCTGATGGTAACGTCCCCCTATGGGAAGCTATGTTGGGTGGACATGAATCAGTGAGCAATCTGTTAGTGAAAAATGGTGCCAACTTACAATGTGGAGATGTGGGTCAATTTGCATGCACTGCCGCTGAGCAGAACAATCTGGACTTGCTCAAGGATATAGTGAGATATGGAGCAAATGTAACTCTCCCTAATAACAGTGTTGGGACCACAGCTCTCCACATTGCAGTCGGTAAAGGCAATGCTGAGATTGTCAAGTTCCTTTTGGATCACGGGGCTGACATGGACAAACCAGACAACCATGGTTGGAACCCCAGAGCACTGGCAGATCAACAAGGACACGGGGAAATTAAGGTTATTTTTGAGTCTTTTGGGGAGCCTAAGGTTCAACCTCCGGTCATTGCGATTCCTGAGCGGTGCCTTGGGAGATTTACATGTGAACCAAGACTGCCTTTGTCTCAGGATCGCATATGGAGCCAAAACCATCCAAAGCAAGGGAGAAATAATTCGCATAACTCACTATTTGGGATAATGTCAGGAGCAAACAAAGGGGAGAAAGGCTTACAACTCTCTCTCAGCATGAACCGTACAAGAAATGGGAGGAACCTTAGAAATTGGCCAGCAAGAGTAACAATTAGTTGTTCCGAAAAGGGTGAAGTTCCTGGGAAGCTTGTGTTTTTACCAGGGAGCTTTAAGGAGCTACTTGAGATTGGAGCTAATAATTTCGGTGTCGTTCCTGCAAAGATTCTAAGCAAAGATGGAGCTGAAATTGATGATCTAGATGTGATTAGAGATGGTGATCATCTTTTGTTTGTCAGTTTTGTTAAGACCTAA 2466 0.4469 MHQSSMCCQQELELTSMDATHYSLSTYPMLPSLGSTTSRRLTLRSFILSPYHPRYRLWQRLLVPLVVYTAWVSPFEFGFLDKPHTLLSVTDNVVNGFFAVDIVLTFFVAYIDKLAYSLVDDPRKIAWRYATSWLALDVISIMPSELARDISPQPLRSYGLFSMLRLWRLRRVSALFSRYTHKVTLFAVHCAGCFYYRIAASYRDPSRPWVGKSNENLFQESVWARYVTSMYWSITTLTTVGYGDLYPVNAMEMIYDIFYMLFNLGLMAYLIGNMTNLRDTMQAASNFARRNKLPARLKDQMLEYMCLKSRTDSEGLHQQGLLDDLPKAIRSSISRDLFYSLVDKVYLFRGVSDHLLFQLVSEMKAEYFPPNEDVLLQNETPTDFYIIVAGTVVVGEAKAGDLCGEFGVLCCRPQRFTVRTKQLSLLLRLNCTTFFNTIQANVVDGSLIMNNFLQHLKELEDPIMKGALVETENLLALGRMSLPLSLSFSALRGYDLLLHQLLKRGLDPNESDDKRRTALHIAASKGSVGCVMLLLDYGADPNVRDSDGNVPLWEAMLGGHESVSNLLVKNGANLQCGDVGQFACTAAEQNNLDLLKDIVRYGANVTLPNNSVGTTALHIAVGKGNAEIVKFLLDHGADMDKPDNHGWNPRALADQQGHGEIKVIFESFGEPKVQPPVIAIPERCLGRFTCEPRLPLSQDRIWSQNHPKQGRNNSHNSLFGIMSGANKGEKGLQLSLSMNRTRNGRNLRNWPARVTISCSEKGEVPGKLVFLPGSFKELLEIGANNFGVVPAKILSKDGAEIDDLDVIRDGDHLLFVSFVKT 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0509 821 Gene3D Jelly Rolls 313 460 IPR014710 -
Bisa02g0509 821 ProSiteProfiles KHA domain profile. 753 821 IPR021789 -
Bisa02g0509 821 ProSiteProfiles Ankyrin repeat region circular profile. 514 545 - -
Bisa02g0509 821 Pfam KHA, dimerisation domain of potassium ion channel 753 815 IPR021789 -
Bisa02g0509 821 ProSiteProfiles Ankyrin repeat profile. 612 644 IPR002110 GO:0005515
Bisa02g0509 821 SMART cnmp_10 347 453 IPR000595 -
Bisa02g0509 821 PANTHER POTASSIUM CHANNEL AKT1 21 816 IPR045319 GO:0005249|GO:0006813
Bisa02g0509 821 Gene3D - 61 279 - -
Bisa02g0509 821 Pfam Ion transport protein 56 282 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bisa02g0509 821 FunFam Potassium channel KAT2 335 460 - -
Bisa02g0509 821 FunFam Potassium channel KAT3 57 279 - -
Bisa02g0509 821 ProSiteProfiles Ankyrin repeat profile. 514 546 IPR002110 GO:0005515
Bisa02g0509 821 ProSiteProfiles cAMP/cGMP binding motif profile. 347 455 IPR000595 -
Bisa02g0509 821 ProSiteProfiles Ankyrin repeat region circular profile. 612 644 - -
Bisa02g0509 821 Pfam Ankyrin repeats (3 copies) 586 660 IPR002110 GO:0005515
Bisa02g0509 821 ProSiteProfiles Ankyrin repeat region circular profile. 547 574 - -
Bisa02g0509 821 CDD CAP_ED 347 441 IPR000595 -
Bisa02g0509 821 SUPERFAMILY Voltage-gated potassium channels 50 277 - -
Bisa02g0509 821 SUPERFAMILY Ankyrin repeat 486 667 IPR036770 -
Bisa02g0509 821 SUPERFAMILY cAMP-binding domain-like 276 456 IPR018490 -
Bisa02g0509 821 Gene3D - 483 666 IPR036770 -
Bisa02g0509 821 PRINTS EAG/ELK/ERG potassium channel family signature 91 101 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa02g0509 821 PRINTS EAG/ELK/ERG potassium channel family signature 226 243 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa02g0509 821 PRINTS EAG/ELK/ERG potassium channel family signature 68 75 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa02g0509 821 PRINTS EAG/ELK/ERG potassium channel family signature 102 111 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa02g0509 821 PRINTS EAG/ELK/ERG potassium channel family signature 252 263 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa02g0509 821 SMART ANK_2a 514 543 IPR002110 GO:0005515
Bisa02g0509 821 SMART ANK_2a 479 510 IPR002110 GO:0005515
Bisa02g0509 821 SMART ANK_2a 578 607 IPR002110 GO:0005515
Bisa02g0509 821 SMART ANK_2a 612 641 IPR002110 GO:0005515
Bisa02g0509 821 SMART ANK_2a 547 576 IPR002110 GO:0005515
Bisa02g0509 821 Pfam Ankyrin repeats (many copies) 501 552 IPR002110 GO:0005515
Bisa02g0509 821 ProSiteProfiles Ankyrin repeat profile. 547 579 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0509 Bisa-ChrBisa02 8717337 8723169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0509 20 815 Ion Channels AT2G25600 55.569 0.0 912