Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0486 ATGGATGGGAACAAGGAAGATGCCTTGAAGTGCTTGAAAATTGGGAAAGATGCATTAGAAGCTGGAGATCGTGCCCGTGCTTTGAAGTTCGTGACCAAAGCTCGCCGTCTTGACCCGACGTTGCCGGTGGACGATTTATTGTCGGCAATAGAGAAGGATACAGCAGATCAACCGGATGTGGCCGCCGCTGGTGGACCATCCGTGACCTCTCCGTCGAAGCCCTCCGATAAACCTTCTATCCGCCGAAGGGGTTCTTCGTCTGCCGGGTCTACGACGTCGTCTTCGTCATATACGGAGGAGCAAATTACAATAGTCAGAGAGATTAGGAGAAAGAAGAATTATTATGAGATTTTGGGATTAGACAATAAGAATTGCACGGTGGAGGATGTACGGAAAGCTTATAGAAAACTCTCTTTGAAAGTTCATCCTGATAAGAACAAAGCTCCTGGTGCTGAGGAAGCTTTTAAATCTGTTTCCAAGGCGTTTCAGTGTCTGAGCAATGAAGAGAGTCGGAAAAAGTATGATCTCCTCGGAGAAGATGATGATACCATCAACGAGAGGCGTGCAACGAGGCACAGGGGGTTTCATCATCATCATCATGGGTATTATGATGCTGACATTGACGCAGAGGAAATATTCAGGAATTTCTTTTTCAATGGGATGGCTCCTGCAACTACTCCTTTTGGTAGCTTTAGTTTTGGACCAGGGATGGCTCCTAGGCAGGCTGATCATGGGTCTAGTGGCTTCAACCTTCGCGTTCTAATTCAGTTGCTTCCAATTCTGATCATTTTGCTTGTAAGTTTCTTTTCCACTTCAGATCAAATCTATATGCTCTCTCGGTCCTATCCATATGTATACAGGTTTACTACGCCGAAGGGTGTCAATTATTATGTCAAGTCCTCCAATTTCGATCAAGATTACCCTCTAAATAGCCATCAACGTACGACAATTGAAGAAGAGGTTGAGAGAGAATACTCGAACATTCTTGATAGGAACTGTCGGTTTGAGTTACAACGCAGACAGTGGGGGTACATCCAGGAAACACCTCACTGTGATATGCTTCGGAAGTTTGATACAGTGAAGTGA 1086 0.4512 MDGNKEDALKCLKIGKDALEAGDRARALKFVTKARRLDPTLPVDDLLSAIEKDTADQPDVAAAGGPSVTSPSKPSDKPSIRRRGSSSAGSTTSSSSYTEEQITIVREIRRKKNYYEILGLDNKNCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKSVSKAFQCLSNEESRKKYDLLGEDDDTINERRATRHRGFHHHHHGYYDADIDAEEIFRNFFFNGMAPATTPFGSFSFGPGMAPRQADHGSSGFNLRVLIQLLPILIILLVSFFSTSDQIYMLSRSYPYVYRFTTPKGVNYYVKSSNFDQDYPLNSHQRTTIEEEVEREYSNILDRNCRFELQRRQWGYIQETPHCDMLRKFDTVK 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0486 361 PANTHER AT29763P-RELATED 1 356 - -
Bisa02g0486 361 PRINTS DnaJ domain signature 134 149 IPR001623 -
Bisa02g0486 361 PRINTS DnaJ domain signature 150 170 IPR001623 -
Bisa02g0486 361 PRINTS DnaJ domain signature 170 189 IPR001623 -
Bisa02g0486 361 Pfam DnaJ domain 113 175 IPR001623 -
Bisa02g0486 361 ProSitePatterns Nt-dnaJ domain signature. 155 174 IPR018253 -
Bisa02g0486 361 ProSiteProfiles dnaJ domain profile. 113 178 IPR001623 -
Bisa02g0486 361 SMART dnaj_3 112 170 IPR001623 -
Bisa02g0486 361 MobiDBLite consensus disorder prediction 68 100 - -
Bisa02g0486 361 MobiDBLite consensus disorder prediction 52 100 - -
Bisa02g0486 361 SUPERFAMILY Chaperone J-domain 88 174 IPR036869 -
Bisa02g0486 361 Pfam Domain of unknown function (DUF1977) 271 341 IPR015399 -
Bisa02g0486 361 Gene3D DnaJ domain 109 226 IPR036869 -
Bisa02g0486 361 CDD DnaJ 113 167 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0486 Bisa-ChrBisa02 8355415 8356500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0486 108 175 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.211 1.20e-08 54.3