Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0476 ATGATGGTACAATCAAAGAAGTTCAGAGGAGTGAGGCAGCGCCACTGGGGCTCCTGGGTTTCAGAAATTCGTCACCCTCTTCTGAAGAAGAGGGTGTGGTTGGGAACATTTGAAACGGCAGAAGAAGCCGCTCGAGCGTACGATCAAGCTGCCATTTTGATGAGTGGCCGGAATGCCAAAACCAATTTCCCGATATTCCAGACTCCCGACGGCGACCCCAAGACTGCGGAAGCCGACATTCACAATAAGGACGGCGCCGCTGCGGCGCATTCGAGGAGCCCGAAGGATCTGGAGGAGATCCTACACGCGAAGCTCCGGAAATGCGGGAAAGTGCCATCGCCGTCGATGACCTGCCTGAGGCTGGATACCAAGAACTGCCACATCGGAGTGTGGCACAAACGCGCCGGCCAACGCTCCGATGACTCCAACTGGGTCCTGACGGTTGAGCTTGGAAAGAAGAGTACTACCGGTGATGCTAACAACAATAATAACAATACCAGTAATACTAATGCTAGTAATAATAATGGGGGTGATCAACAGACGACGTCGTATAAGGAGTCCTCATCAACATCATCATCATTACCAGGAGGCATTAATGAAGAGGAGAGAATTGCACTTCAGATGATCGAAGAACTTCTCAACAGAAACTATCCCACACCTTCATTTCATGACATAGAAGAGGGGGATGCACAAGCACATCAACATGCTGGAAACTTATTTATTTAA 726 0.4972 MMVQSKKFRGVRQRHWGSWVSEIRHPLLKKRVWLGTFETAEEAARAYDQAAILMSGRNAKTNFPIFQTPDGDPKTAEADIHNKDGAAAAHSRSPKDLEEILHAKLRKCGKVPSPSMTCLRLDTKNCHIGVWHKRAGQRSDDSNWVLTVELGKKSTTGDANNNNNNTSNTNASNNNGGDQQTTSYKESSSTSSSLPGGINEEERIALQMIEELLNRNYPTPSFHDIEEGDAQAHQHAGNLFI 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0476 241 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 4 178 - -
Bisa02g0476 241 MobiDBLite consensus disorder prediction 153 197 - -
Bisa02g0476 241 FunFam Ethylene-responsive transcription factor 2 6 65 - -
Bisa02g0476 241 CDD AP2 6 65 IPR001471 GO:0003700|GO:0006355
Bisa02g0476 241 MobiDBLite consensus disorder prediction 153 198 - -
Bisa02g0476 241 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Bisa02g0476 241 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Bisa02g0476 241 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Bisa02g0476 241 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Bisa02g0476 241 SUPERFAMILY DNA-binding domain 7 65 IPR016177 GO:0003677
Bisa02g0476 241 Gene3D AP2/ERF domain 6 66 IPR036955 GO:0003700|GO:0006355
Bisa02g0476 241 Pfam AP2 domain 7 55 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0476 Bisa-ChrBisa02 8154094 8155571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0476 2 216 AP2-EREBP Transcription Factor Family AT1G15360 56.744 2.71e-72 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa02g0476 AP2 8.1e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g0476 02 8154094 8155571 Bisa09g1197 09 17218137 17218945 ECH
Bisa02g0476 02 8154094 8155571 Bisa02g0476 02 8154094 8155571 ECH