Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0468 ATGTCAAGCTGCAACAACATCAATGTTGCCCCTGAGCAACTGTGCTACATCCCTTGTAACTTTTGCAACATTGTTCTTGCGGTGAGTGTTCCATGCAGCAGCTTGTTTGACATAGTGACGGTTCGATGTGGCCACTGCAGCAATCTGTGGTCAGTGAACATGGCTGCTGCGTTTCAGTCACTGTCATGGCAACAAGATGTTCAGGGCTGTAGCTACACGAACATTCCAGAGTACAGAATTGACACAGGAATAGGATCGTCTTCTAAAGGCAACAGTAATAATATTAATAGGATTGCAATGAGAGCTCCCACCAACCATGTCACTCAGGAAAGGGTTGTCAATCGCCCTCCCGAGAAGAGGCAGCGCGTACCCTCTGCATATAATCAGTTCATAAAGGAAGAGATTCAGAGGATCAAGGCTAATAATCCAGATATCAGTCACAGGGAAGCATTCAGTACAGCTGCAAAGAACTGGGCACACTTCCCTCATATTCATTTTGGGCTGATGTTGGAGACCAACAATCAAGCTAAGATGGAGAATGGTACTGGGAAGCATTTAATGTCAAGGGCAGCACTTTTGAACAAATGA 588 0.4541 MSSCNNINVAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCSNLWSVNMAAAFQSLSWQQDVQGCSYTNIPEYRIDTGIGSSSKGNSNNINRIAMRAPTNHVTQERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLETNNQAKMENGTGKHLMSRAALLNK 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0468 195 CDD HMG-box_SF 122 158 - -
Bisa02g0468 195 SUPERFAMILY HMG-box 112 161 IPR036910 -
Bisa02g0468 195 Gene3D High mobility group box domain 106 163 IPR036910 -
Bisa02g0468 195 PANTHER PROTEIN YABBY 6-RELATED 1 178 IPR006780 GO:0007275
Bisa02g0468 195 FunFam Axial regulator YABBY 113 182 - -
Bisa02g0468 195 Pfam YABBY protein 10 168 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0468 Bisa-ChrBisa02 8007965 8011464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0468 9 178 C2C2-YABBY Transcription Factor Family AT2G26580 73.529 1.02e-87 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Bisa02g0468 YABBY 1.1e-70 CL0114