Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0450 ATGGACCTTCAATTGGGTCTGGCTCTCCCTAGCAGTAATGCCTGTGATCCTCGGGGTCTCTTCACTTCGTTGCCATGGAATCATACTCATACTCCTTCTAACGTTCCTCACAAGAAGCGTAGTTTGGGCCAACTCTTTGAACGTGACACAGATGTTCTGCTTCCCACTCTGCCTCTCCTGCCATTAACACCTGCTCAGCAACAAGATGAAGATGACGACCTTGAAGACCACTATAACAATAGCTGCTGCTCTGTTATCACCAAAAATGATCATGGGGATGATGGAGAAGGTGTGGTGGGATGGCCTCCCATAATTTCGCAGAGGAAGAAGCTTCGGTGTGATGGATCAGATGCAGTGTATGTGAAGGTGAAGATGGAGGGGGAAGGAATTGGACGAAAGGTTGATCTTAGCTTGCATCATTCTTTTCCAAACCTCAAGGAAACCTTGATTGCCATGTTTGGAAAATGTCAACAACATTCAAACTGCTACGAACTAGCTTATCAGGACAAAGAAGGTGATTGGTTGATTGCAGAAGATCTGCCATGGAAAAATTTCGTTGAGTGCGCGCGACGTCTTAAATTGCTGAGGAGCAATATGTAG 600 0.4583 MDLQLGLALPSSNACDPRGLFTSLPWNHTHTPSNVPHKKRSLGQLFERDTDVLLPTLPLLPLTPAQQQDEDDDLEDHYNNSCCSVITKNDHGDDGEGVVGWPPIISQRKKLRCDGSDAVYVKVKMEGEGIGRKVDLSLHHSFPNLKETLIAMFGKCQQHSNCYELAYQDKEGDWLIAEDLPWKNFVECARRLKLLRSNM 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0450 199 Pfam AUX/IAA family 162 197 IPR033389 -
Bisa02g0450 199 Pfam AUX/IAA family 80 156 IPR033389 -
Bisa02g0450 199 ProSiteProfiles PB1 domain profile. 118 199 IPR000270 GO:0005515
Bisa02g0450 199 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 197 IPR003311 GO:0005634|GO:0006355
Bisa02g0450 199 Gene3D - 119 199 - -
Bisa02g0450 199 SUPERFAMILY CAD & PB1 domains 114 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0450 Bisa-ChrBisa02 7715140 7717372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0450 88 197 B3 DNA Binding Superfamily AT5G20730 31.624 6.52e-11 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa02g0450 AUX_IAA 7.4e-12 CL0072