Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0449 ATGATTCAAAGTGGCTTGCAAAAAGCCAAGAAGAAGGACACGCAAAACCCACTTTGCATGCAGATTGTGGGGTTTCATGGGAAAATGATTGAGGGTGATGGGGTCACTTTCACTGAGCAGGGTAAAGTTTCATGTGATCTGCAGGGGTATAAACGAAAGTGCCTTAAAGTAGCTAATGGCAGACATTCCCGGGTCACAAAAAGAGAATTACTGATGCCAGTCAGCTGTCATATCCCTGACCCTAGAAGAAGGAAATTTAGTGCTCTCTACGGCTCCACCGTTTATGAGCAAAAAGCTTCATTTCATATACATCCCAAATTCTCCACTCCGGAGATTTTCTTATCTTTTTCTAAACCAAGATATCTCATGGGAAGTAAAGGACTGGCACTGAAGCCACAGCCCAAAAAGAATCTATGGAAGCCTGAGGAAGACCTGGTTCTGAAAACCTACATTGAAGCACACGGTGAAGGAAACTGGGAAGCTGTGTCCAAAAATTCCGGGCTGAAGAGAGGAGGGAAGAGTTGCAGGTTAAGATGGAAGAACTACTTGAGACCCGACATCAAACGTGGAGGTATGTCTGAAGAGGAAGAAGACCTCATCATCAGACTACATAAGCTTCTTGGTAATCGATGGTCATTGATAGCTGGAAGGCTTCCTGGTAGAACCGATAACGAAGTGAAAAACTACTGGAATACCCATTTGAACAAGAGATGCCCTCGGGGCAAAAGGAAAGCCACCGATTCAAAAGACGATTCCCAAGAAGCCAACAAGAAACCACGGACCAGTGATTCTGACTTTCCGAATTCCACAAACATCGCAGAAACAGGGCTGTTGGATGCGAGGAAGGAGGAGAGCAGTAACATTACAAACTCGTGGATCGACGAAACGCACAGCTTCGACTGTGACCTAGATTTTCCGATTGTGCCTGGGAATAGTGCGGTATTTGGTTTTGATGACGAGCCTTTCACGACCAACTTGGACTCTGTTGTCTTGTTTGAAACCGAAGCACTAGACTACGGTTGGCTGGAGTCCAATTCGCACATGCAATGGATCATGCCGTAA 1062 0.4557 MIQSGLQKAKKKDTQNPLCMQIVGFHGKMIEGDGVTFTEQGKVSCDLQGYKRKCLKVANGRHSRVTKRELLMPVSCHIPDPRRRKFSALYGSTVYEQKASFHIHPKFSTPEIFLSFSKPRYLMGSKGLALKPQPKKNLWKPEEDLVLKTYIEAHGEGNWEAVSKNSGLKRGGKSCRLRWKNYLRPDIKRGGMSEEEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKRCPRGKRKATDSKDDSQEANKKPRTSDSDFPNSTNIAETGLLDARKEESSNITNSWIDETHSFDCDLDFPIVPGNSAVFGFDDEPFTTNLDSVVLFETEALDYGWLESNSHMQWIMP 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0449 353 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 131 279 - -
Bisa02g0449 353 CDD SANT 139 183 IPR001005 -
Bisa02g0449 353 SUPERFAMILY Homeodomain-like 135 230 IPR009057 -
Bisa02g0449 353 CDD SANT 192 234 IPR001005 -
Bisa02g0449 353 FunFam Transcription factor TT2 192 262 - -
Bisa02g0449 353 MobiDBLite consensus disorder prediction 237 271 - -
Bisa02g0449 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 131 183 IPR017930 -
Bisa02g0449 353 ProSiteProfiles Myb-like domain profile. 184 234 IPR001005 -
Bisa02g0449 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 184 238 IPR017930 -
Bisa02g0449 353 Pfam Myb-like DNA-binding domain 137 183 IPR001005 -
Bisa02g0449 353 Pfam Myb-like DNA-binding domain 189 234 IPR001005 -
Bisa02g0449 353 FunFam MYB-related transcription factor 135 188 - -
Bisa02g0449 353 Gene3D - 192 264 - -
Bisa02g0449 353 Gene3D - 136 188 - -
Bisa02g0449 353 ProSiteProfiles Myb-like domain profile. 131 183 IPR001005 -
Bisa02g0449 353 SMART sant 135 185 IPR001005 -
Bisa02g0449 353 SMART sant 188 236 IPR001005 -
Bisa02g0449 353 MobiDBLite consensus disorder prediction 241 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0449 Bisa-ChrBisa02 7689160 7693201 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0449 135 315 MYB Transcription Factor Family AT5G52600 54.255 5.22e-64 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa02g0449 Myb_DNA-binding 3.7e-11 CL0123