Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0421 ATGGCTAACACTGCATTATTCTTGATGCTATTGCTGCAATTGGCAACAATTTTCACTTCTGGAGTTTTCTTACAGTCAAGGGATTGCGGTGCTAATCGGGTAGCGTACTTATATTCTCATGGTCAGGAACTTTATTTCATAAACAAGAATTTAGTAAACAAAGATACTTTCTGTAATACCCTCGAACTATATATTGCAAATGGTTGCGATGTGAAGGACTACTTTCAAAACACCAACTGCACATTGGATGTTTCTATAGTTGATTTACCTTCAAAGGCAGGAAGAAAACTTTTGCAGCAGGATTTAAGCAATAATTCCACATCCCAGGCTCACCGAAATGTTTCCAAGCCTCTATCAGCCCCTCAAGTTGGGATAGTTGCAGGTGGAGTTATCTTAGCTTGTTGTGCTTTTCTTTGTCCTTGTATTTATGGGAAGAAAAGAAAAGCCTCTGCTCATGCTGTTCTGACCAAGGAGTCAAATTCAATTGATTCGGCTTCCCCCTTTGAAGTGAACTCTGTTTCTGATAAGATACCTGCAAGTCCACATCGGGTGCCACCTAGTCCTTCAAGATTCTCAATGTCTCCAAAACTCAGTAGGATTGGGTCATTGCATCTTAACGTGAATCAAATTGCAAGAGCAACGCGGAACTTCTCAGATACTTTACAAATAGGAGAAGGAGGTTTTGGAACTGTCTACAAGGCTCAGCTAGAAGGTGGCTTAGTTGTTGCTGTGAAACGTGCAAAAAGGGAACATTTTGAGAGTTTGAGAACCGAATTCAGTAGTGAAGTTGAGATTCTAGCGAAAATTGATCATCGAAACCTGGTGAAGCTACTAGGTTACATTGACAAAGGAAATGAACGCCTTCTTATTACTGAGTATGTGCCAAATGGTACTCTGAGAGAACATTTGGATGGTCTACGTGGAAATATCCTTGATTTCAATCAACGCCTTGAAATTGCTATTGATGTTGCTCATGGCTTGACCTATTTGCATACATATGCAGAAAAGCAAATTATCCATCGAGATGTGAAATCATCGAACATTCTTCTGACTGAAAGCATGAGAGCCAAAGTTGCTGATTTTGGATTTGCAAAGCTTGGTCCGTCCAATGCCGATCAAACACACATTTCTACCAAAGTGAAGGGAACAGTTGGTTATCTGGACCCTGAGTACATGAAAACATACCAGCTCACTACCAAGAGTGATGTTTACTCATTCGGAATTTTGCTTCTAGAAATCTTGACGGGTCGCCGTCCAGTGGAGTTGAAGAAACCTATGGAAGAGCGGGTCACACTACGATGGGCTTTCAGGAAGTTCGATGAAGGAAATGTGATGGAGCTGCAGGATCCTTTAATGAAGGAAGCTGTAAATGCAGAGGTTCTCATGAAGTTTCTTGACTTGGCATTTCAATGTGCAGCACCCGTTAGGGCGGATCGGCCCGACATGAAATCGGTGGTGCAGCAATTGTGGGCAGTAAGATCTGAGTACCTGAAGAGTGCAAAGAGAGGATAG 1512 0.4193 MANTALFLMLLLQLATIFTSGVFLQSRDCGANRVAYLYSHGQELYFINKNLVNKDTFCNTLELYIANGCDVKDYFQNTNCTLDVSIVDLPSKAGRKLLQQDLSNNSTSQAHRNVSKPLSAPQVGIVAGGVILACCAFLCPCIYGKKRKASAHAVLTKESNSIDSASPFEVNSVSDKIPASPHRVPPSPSRFSMSPKLSRIGSLHLNVNQIARATRNFSDTLQIGEGGFGTVYKAQLEGGLVVAVKRAKREHFESLRTEFSSEVEILAKIDHRNLVKLLGYIDKGNERLLITEYVPNGTLREHLDGLRGNILDFNQRLEIAIDVAHGLTYLHTYAEKQIIHRDVKSSNILLTESMRAKVADFGFAKLGPSNADQTHISTKVKGTVGYLDPEYMKTYQLTTKSDVYSFGILLLEILTGRRPVELKKPMEERVTLRWAFRKFDEGNVMELQDPLMKEAVNAEVLMKFLDLAFQCAAPVRADRPDMKSVVQQLWAVRSEYLKSAKRG 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0421 503 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 189 293 - -
Bisa02g0421 503 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 83 490 - -
Bisa02g0421 503 Gene3D Phosphorylase Kinase; domain 1 189 293 - -
Bisa02g0421 503 ProSiteProfiles Protein kinase domain profile. 217 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0421 503 CDD STKc_IRAK 223 489 - -
Bisa02g0421 503 ProSitePatterns Protein kinases ATP-binding region signature. 223 245 IPR017441 GO:0005524
Bisa02g0421 503 SMART serkin_6 217 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0421 503 Pfam Protein tyrosine and serine/threonine kinase 222 489 IPR001245 GO:0004672|GO:0006468
Bisa02g0421 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 338 350 IPR008271 GO:0004672|GO:0006468
Bisa02g0421 503 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 294 503 - -
Bisa02g0421 503 SUPERFAMILY Protein kinase-like (PK-like) 199 491 IPR011009 -
Bisa02g0421 503 Gene3D Transferase(Phosphotransferase) domain 1 294 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0421 Bisa-ChrBisa02 7022291 7026031 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0421 122 489 Receptor kinase-like Gene Family AT3G46290 40.160 1.44e-75 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Bisa02g0421 PK_Tyr_Ser-Thr 1.7e-51 CL0016