Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0399 ATGGAAAGTTTGTCCATTTCCGCAAACAACAAAACCCAAGCTGTATTTTGGGCTTTCATCAGGATGCACCACGCGTGTAGATTGGCATTACTTCACCCCAGAATTTGTCTATCAGATAAGTTCCTCTATCTTCCCAGATTTCGGGTTTTTATGAGTGCTGATGAAAACATAGATGGTTGTAAGCTGCCATCAGTAATTATAGATCTTGTTGTTGAGCCTGTACTTCTTTCTCGGTTTTCATATGGATTCTGTTCTATCAAGCTGATAAGCCTTGGTTACGATATGCTTGTATCAGTTCTTTGCTGTGGAATTGTTGGGTCCAAAATGGGCAAGAAAAAGAACCAAGTAGGAGAAAAATCAAGTGACGGTAGTGGAAATCAAAGCAAAGTGGGAGAAAATAACTCCAAAGCTTATGATAATGATACTATGGTTTTTATATCCATGTCTCAAGAATTGAAGGATGAGGGGAACAAGCTGTTCCAAAAGAGGGACCACGAAGGAGCTATGCTGAAATATGAGAAAGCCCTCAAATTGCTTCCGATAAACCATATAGATGTGTCTTGTCTGCGGAGTAACATGGCTACATGCTACATGCAGATGGGACTCAGTGAGTATCCGAGGGCAATCCATGAATGCAATTTGGCTCTTGAAGTTACACCAAAGTACAGTAAGGCACTTTTGAAGAGGGCAAGGTGCTATGAGGCTTTAAATCGACTGGATTTAGCTTTGAGAGATGTTACTAACGTTTTGAAGATGGAGCCAAATAATATCATGGCATTGGAAATTTCCGAAAGGGTGAAAGGTGCACTTGAGGAGAAGGGATTAAAGGTAGCTGACATAGTGATTGAGTTGTCTCCAGATAATGTTGAACCTCCTCATGCGCCTCCAGAAACAGTAAAAGATAAGAGTCACAAGAAGAAGAGCAAAAAAGTTGAGGTAATTGCTGCTGATAATACAGTTGCAGAAAAGCAATCTGAGGAGAAATTTGAAGATAAGAAGGCTGACTCCATTATTGAGAAGAATAAAGTGAAGGGCAATATTGAGGGAACTAAGAAAGTGGAGGGCAATATTGAGGAAAATAAGAAAGTGCAGGGCAATATTGGGGAAAATAAGAAAGTGGAGGGCAATATTGAGGATACCAAGGCTAAGAACAAATCCAAAAAGAAGGTGGCCAAGGAAAAGATGGACGAGAAGAAGGTTGAGGTGAAGGAGGTTGTCAAGGAAAAAATTAATGGTAGAATGGAAGATAAACCAAAGAAAACAGCAAAAATTGTTTTCGGTGAAGATATCAGATGGGCAGAATTACCATATAATTGCAGTCTCTTACAGCTAAGGGAAGTTATCAGTGATCGGTTTCCAAGCCTTGGAGCAATTCTTGTCAAATACAGGGACCAAGAAGGTGACTTAGTCACAATCACTTCTGATGAAGAATTAAGATGGGCTGAAACATCAGCAGGATCGCATAGCTCCATCCGCCTGTACATAGTGGAGACCGATCCTGAGCAGGATCCATTCTTTGAGAAAATTAATGAAAAGAAGGGGCAAATTCCCAGCATTTATAATGCAGCTGAGAATGGTTGTGTGGCAAAAGAAAAGGAAATGGTTAATTCATCTTGCATTGAGGATTGGATAATCCAGTTTTCCCAACTGTTCAAGAACTATGCTGGTTTTGAATCTGACAGATATTTGGATTTTCACGAACTTGGAATGAAGCTGTATTCTGAGGCTATGGAGGAGACAGTTACTAGTGAAGAAGCGCAAGGCCTATTTGATATGGCTGGAGACAAGTTTCAAGAGATGGCAGCTCTAGCATTGTTCAACTGGGGAAATGTTCACATGTCCAGGGCAAGGAAGAAAGTGAATTTCACAGAAGAATCTTCTAAAGAGCATCTGCATGAACAAATAAACAATTCATATGACTGGGCACAGAAAGAATATAAAAGAGCAGGAGAAAAATATGAAGCAGCCATTAAAATTAAAGCAGATTTCTATGAAGGCTTCCTGGCACTGGGGCAACAGCAGTTTGAGCAAGCAAAACTTTCTTGGTATTATGCAATTAGCAGCAATGTTGAGTTAGCAACATGGCCCTCTACTGAGGTTCTTCAACTTTACAACAATGCCGAGGAAAACATGGAGAAAGGAATGCAGATATGGGAAGAATCAGAAGGGCGATACTTGAGTAATACCTCCAAATCAAAGGATGTCAAATTACATTTGCGAAACATGGGATTCCATGGGCTGTTGCAAAATATATCATCAGAAGAAATTGCGGCACAAGTAGCAAAGTTGAGGTCTCAAATAAATATCCTGTGGGGTACCATGCTATATGAACGTTCAGTTGTGGAATTCAAATTAGGGCTACCAGTATGGCATGAATCTCTAGAAGTTGCAGTGGAGAAATTTGCACTTGCTGGAGCTTCTCCAACAGATATTGCTGTAATGTTGAAGAATCACTGTTCAAATAATACTGCTGCAGAAGGTCTAGGATTCAAAATCGATGAAATAGTACAGGCATGGCATGATATGTATGAAGCTAAGAAGTGGCAGAATCAAGTTTCATCATTTCATCTAGAGCCATTATTCAGAAGGCGAGTTTCAAAAATTTATCATGCCTTAGAGCTTGCATGA 2628 0.4003 MESLSISANNKTQAVFWAFIRMHHACRLALLHPRICLSDKFLYLPRFRVFMSADENIDGCKLPSVIIDLVVEPVLLSRFSYGFCSIKLISLGYDMLVSVLCCGIVGSKMGKKKNQVGEKSSDGSGNQSKVGENNSKAYDNDTMVFISMSQELKDEGNKLFQKRDHEGAMLKYEKALKLLPINHIDVSCLRSNMATCYMQMGLSEYPRAIHECNLALEVTPKYSKALLKRARCYEALNRLDLALRDVTNVLKMEPNNIMALEISERVKGALEEKGLKVADIVIELSPDNVEPPHAPPETVKDKSHKKKSKKVEVIAADNTVAEKQSEEKFEDKKADSIIEKNKVKGNIEGTKKVEGNIEENKKVQGNIGENKKVEGNIEDTKAKNKSKKKVAKEKMDEKKVEVKEVVKEKINGRMEDKPKKTAKIVFGEDIRWAELPYNCSLLQLREVISDRFPSLGAILVKYRDQEGDLVTITSDEELRWAETSAGSHSSIRLYIVETDPEQDPFFEKINEKKGQIPSIYNAAENGCVAKEKEMVNSSCIEDWIIQFSQLFKNYAGFESDRYLDFHELGMKLYSEAMEETVTSEEAQGLFDMAGDKFQEMAALALFNWGNVHMSRARKKVNFTEESSKEHLHEQINNSYDWAQKEYKRAGEKYEAAIKIKADFYEGFLALGQQQFEQAKLSWYYAISSNVELATWPSTEVLQLYNNAEENMEKGMQIWEESEGRYLSNTSKSKDVKLHLRNMGFHGLLQNISSEEIAAQVAKLRSQINILWGTMLYERSVVEFKLGLPVWHESLEVAVEKFALAGASPTDIAVMLKNHCSNNTAAEGLGFKIDEIVQAWHDMYEAKKWQNQVSSFHLEPLFRRRVSKIYHALELA 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0399 875 Gene3D Tetratricopeptide repeat domain 147 276 IPR011990 GO:0005515
Bisa02g0399 875 SMART tpr_5 223 256 IPR019734 GO:0005515
Bisa02g0399 875 SMART tpr_5 149 182 IPR019734 GO:0005515
Bisa02g0399 875 SMART tpr_5 187 222 IPR019734 GO:0005515
Bisa02g0399 875 ProSiteProfiles TPR repeat profile. 223 256 IPR019734 GO:0005515
Bisa02g0399 875 MobiDBLite consensus disorder prediction 119 136 - -
Bisa02g0399 875 MobiDBLite consensus disorder prediction 113 136 - -
Bisa02g0399 875 ProSiteProfiles TPR repeat profile. 149 182 IPR019734 GO:0005515
Bisa02g0399 875 CDD PB1 427 495 - -
Bisa02g0399 875 MobiDBLite consensus disorder prediction 287 307 - -
Bisa02g0399 875 SMART PB1_new 419 498 IPR000270 GO:0005515
Bisa02g0399 875 SUPERFAMILY CAD & PB1 domains 421 509 - -
Bisa02g0399 875 Gene3D - 420 501 - -
Bisa02g0399 875 PANTHER PROTEIN CLMP1 108 873 IPR044517 -
Bisa02g0399 875 Pfam PB1 domain 421 497 IPR000270 GO:0005515
Bisa02g0399 875 SUPERFAMILY TPR-like 150 261 IPR011990 GO:0005515
Bisa02g0399 875 Coils Coil 388 408 - -
Bisa02g0399 875 ProSiteProfiles PB1 domain profile. 419 498 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0399 Bisa-ChrBisa02 6729913 6735104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0399 137 256 Calmodulin-binding Proteins AT3G25230 31.818 7.55e-09 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g0399 02 6729913 6735104 Bisa02g0399 02 6729913 6735104 ECH