Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0379 ATGGCAAGTAATGGTACTGAAAAGATTCATGGCGATAATGGTACTGAAAGTTCAGAAACCACCATTGAGATAAAGATTAAAACATTGGATTCACAAACATATACTCTCAAAGTGGATAAACAGATGCCAGTACCTGCTTTGAAAGAACAGATTGCTTCTGTAACTGGAGTGTTGTCAGAGCGGCAGCGCTTAATTTGTCGAGGAAAAGTTCTGAAGGATGATCAACTCCTTTCTGCCTACCATGTTGAAGATGGTCACACATTGCATCTGGTTGTCAGGCAACCTGATCTACCATCACTGGGGAGTTTGCCCAATCATTCAGCTACTGACCCACATTCAAGCACAAGCAATAGTCACAGTAATCAAGTAGCCCCTGGTGTTTTTATTGAAACATTTAATGTGCCTGTTCAGGGAGATGGAGTTCCTCCAGAAGTCAATAGAATTATTTCTGCTATTCTAGGATCTATTGGAGTTTCAAATTTTGCAAGTGGCAGTGAAGGGATTGATGTCAGGGGGCATGATTCCCAAGGGTTTGGAAGAACATCAGGTTCTAGTGGCATATCAGATTCATTTCATCCTGTACCCGAACAAGCTGGTTTGCGGAACTCATCTGATAGATCGCGTAATACCTTTGGACTCCCAACAGCAGTTTCTTCTTTGGGGTCTTTACAGCCTCCTGTCATTCCTGATTCTTTGACAACTTTGTCCCAGTACCTGAGTCATCTAAGGCATGAATTTGAAGCCATTGTCAGAGAAGGGGGAAATAATATCCAAGCAGAAGTGGCTCATAGGAATGAAGAAGGATCCATATCGTCTTCATCTTCAGGTGCTACACCAGAAGGGCTTTTGTCACCTGCATCCTTGGCTGAAGTCTTGCTTTCTACCAGGCGAATGTTCAATGAACAAGCTGGCGAGTGTTTATTTCAACTTGCAAGACAACTGGAGAATCAAGCCAATGTGACTGATCCCTTGTTGCGGTCAAGCACACAATCTAGGGCTTGGAGGACTGGAGTTTTGTTTTACAATCTTGGTGCATTTTTACTTGAGCTTGGTCGTACGACCATGGCGTTACGTTTGGGTCAATCACCGTCTGAAGCTGTAGCTAATGGCGGACCAGCAGTTTTTATATCCTCATCTGGTCCTAACCATATCATGGTTCAGCCTCTTCCTTTTCAACCTGGAGGAAGCTTTGGTGCTGCCCCTGTTGGAGCTGCGCAGTCCCCCTCTGGTCTAGGCAGTGGACTTGGCTCAAGTTTTTATCCAAGGCGTATAGATATACAGATACGGCGAGGTACATCAACATCCTCACCCAGTGTCAACCGAGAAGAACATGGTGATACACAGTCTGGCTCAGTACAAAGAAATCCAGTTGAAGTTTCTGTTAATCAAACAAGCTCAAGACTTCCAGAGGATTTATCTTTTGCTGGGGAGTCTGGAGTACGGATATTGCCAATAAGAACTATGGTTGCGGCATTACCTAGCCCCTTAGGTCGCACATCTTCAGAATCTTCTGGTAATTCTATAGGACTTTACTACCCGGTTTTTGGGAGATTGCAACATATACCCTCTGGACATGGGAATAGTGAATCAGGATCTCAACCATCTAGTCAGCATCATGCTTCTGGTCTTCATGATATTCAACAGTCAACTCCTGAATCTACTGGGCAAAGGCAAAGCATGGATGATCCTGCAAGAAATGGACCCTCATCGACTCCTGGCTTAAGACAAGAGCCATCTAATACCCGCAGGGTGAACATCAATATTTTGACAGCTGGTGGGCTCCAAAACAGCCAAGATTCTGAGAGGCAGATACCTAATAATGTACTTCAGTTTATAAGGGCACTCTTTCCTGGTGGTGAAATTCATGTTGAAGATTCCAGTTTACAGGGAACAACTGCTGCTCCTACCTCAGATCATGCTGGAACATCAATGGGTACTGCTCATGCCCCTGAAGCAGAACCCAGAGCTAGTGATGAAGGAATATTTTTGTCTAATATACTCCGTGAGGTCATGCCCCTCATATCTCAACAAGCAGGGTCTGGGACACACGAAACCCCTCAAGTTGAAAATGCTTCAGGAAATCAAACAGTTTCTGATTCTTCCACCCAGGGTGGGACGTCACGCAGACAGAGTGAATCTGAGCCAACCCCCCCTAATCCAAAACGTCAAAAGATGGAGTGA 2181 0.4475 MASNGTEKIHGDNGTESSETTIEIKIKTLDSQTYTLKVDKQMPVPALKEQIASVTGVLSERQRLICRGKVLKDDQLLSAYHVEDGHTLHLVVRQPDLPSLGSLPNHSATDPHSSTSNSHSNQVAPGVFIETFNVPVQGDGVPPEVNRIISAILGSIGVSNFASGSEGIDVRGHDSQGFGRTSGSSGISDSFHPVPEQAGLRNSSDRSRNTFGLPTAVSSLGSLQPPVIPDSLTTLSQYLSHLRHEFEAIVREGGNNIQAEVAHRNEEGSISSSSSGATPEGLLSPASLAEVLLSTRRMFNEQAGECLFQLARQLENQANVTDPLLRSSTQSRAWRTGVLFYNLGAFLLELGRTTMALRLGQSPSEAVANGGPAVFISSSGPNHIMVQPLPFQPGGSFGAAPVGAAQSPSGLGSGLGSSFYPRRIDIQIRRGTSTSSPSVNREEHGDTQSGSVQRNPVEVSVNQTSSRLPEDLSFAGESGVRILPIRTMVAALPSPLGRTSSESSGNSIGLYYPVFGRLQHIPSGHGNSESGSQPSSQHHASGLHDIQQSTPESTGQRQSMDDPARNGPSSTPGLRQEPSNTRRVNINILTAGGLQNSQDSERQIPNNVLQFIRALFPGGEIHVEDSSLQGTTAAPTSDHAGTSMGTAHAPEAEPRASDEGIFLSNILREVMPLISQQAGSGTHETPQVENASGNQTVSDSSTQGGTSRRQSESEPTPPNPKRQKME 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0379 726 MobiDBLite consensus disorder prediction 677 718 - -
Bisa02g0379 726 PRINTS Ubiquitin signature 53 73 IPR019956 -
Bisa02g0379 726 PRINTS Ubiquitin signature 74 95 IPR019956 -
Bisa02g0379 726 PRINTS Ubiquitin signature 32 52 IPR019956 -
Bisa02g0379 726 MobiDBLite consensus disorder prediction 176 213 - -
Bisa02g0379 726 CDD Ubl_ubiquitin_like 24 91 - -
Bisa02g0379 726 Pfam Ubiquitin family 24 94 IPR000626 GO:0005515
Bisa02g0379 726 MobiDBLite consensus disorder prediction 626 656 - -
Bisa02g0379 726 ProSiteProfiles Ubiquitin domain profile. 22 97 IPR000626 GO:0005515
Bisa02g0379 726 MobiDBLite consensus disorder prediction 430 472 - -
Bisa02g0379 726 Gene3D - 15 113 - -
Bisa02g0379 726 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 11 725 - -
Bisa02g0379 726 MobiDBLite consensus disorder prediction 177 191 - -
Bisa02g0379 726 MobiDBLite consensus disorder prediction 523 581 - -
Bisa02g0379 726 SUPERFAMILY Ubiquitin-like 16 99 IPR029071 -
Bisa02g0379 726 FunFam Large proline-rich protein BAG6 14 107 - -
Bisa02g0379 726 MobiDBLite consensus disorder prediction 521 581 - -
Bisa02g0379 726 MobiDBLite consensus disorder prediction 100 122 - -
Bisa02g0379 726 SMART ubq_7 22 93 IPR000626 GO:0005515
Bisa02g0379 726 MobiDBLite consensus disorder prediction 677 726 - -
Bisa02g0379 726 MobiDBLite consensus disorder prediction 99 122 - -
Bisa02g0379 726 MobiDBLite consensus disorder prediction 626 643 - -
Bisa02g0379 726 MobiDBLite consensus disorder prediction 430 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0379 Bisa-ChrBisa02 6400176 6415272 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0379 22 93 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 37.500 5.21e-09 53.5