Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0377 ATGTGTGTGCAGGACGCTGAGCATCAAGTTGGCCCCGACATCGAAAACCCTGATATTAGAACCAAGCCTTGGCCTTTGCATTGTGACCTCTTGCATACCCGTGTGGAAATGGACTCTCCTTTCAGAACTCCCAGCGTTCGGAGTCCGCTTCCTCTGGAAAGCATATGTGAGGATACAGTGATTGCAGACAAAAAACAGAACCAGATGAACTTTGTCCCTGCTCTGAGATCTGGAGAGTGGTCGGATATTGGACGTCGCCCTTCTATGGAAGATACCCACATCTGCATTGGAGACTTAGGAAAGAAGTTTGGTTATGATGTACTCAGTAAGGAAGCTATTTCATTTTATGGGGTATTTGATGGACATGGAGGAAAGAACGCTGCAGTGTTTGTCCGCGATCATCTACCAAGAGTGATTATTGAGGATGCTGACTTTCCTTTGGAGCTAGAGAAGGTGGTCACAAGGTCATTCTTGCGGATAGATGCTGCATTTGCAAAACCATGCTCTCTTGAAAATTCCTTGTCTTCTGGTACAACTGCATTAACCGCAATTATATTTGGGAGGTCTTTGCTTGTGGCTAATGCTGGAGACTGCAGGGCTGTATTGTCCCGTTGTGGAGGGGCAATAGAAATGTCCAAAGATCACAGGCCCTTCTGCATCAAAGAAAGGAAGCGAATTGAGTCTCTGGGTGGATTCATCGAGGACGGTTATCTGAATGGCCAATTAGGTGTCACTCGAGCACTAGGTGATTGGCACCTTGAAGGCATGAAGGAGATGAGTGAAAGAGGAGGACCATTGAGTGCTGAGCCAGAACTGAAACTGATGACACTAACCAAAGAAGATGAGTTCTTGATAATCGGAAGCGATGGAATCTGGGATGTTTTTACCAGCCAGAATGCGGTAGATTTTGCTAGGAGGAGTCTTCAAAAGCATAATGACGTGAAACTTTGTTGCAAGGAGATAGTGGAGGAAGCCATAAAGAGAGAATCATCTGATAACTTGACAGTTGTAATGGTGTGTTTTCACTCAGAGCCACCTCCTCCTGTGGTGGTAGAGAGGCCAAGGATTAGGAGAAGCATATCTGCTGAGGGACTTCAGAATCTCAAGTCATTGCTGGAAGGATGA 1125 0.4596 MCVQDAEHQVGPDIENPDIRTKPWPLHCDLLHTRVEMDSPFRTPSVRSPLPLESICEDTVIADKKQNQMNFVPALRSGEWSDIGRRPSMEDTHICIGDLGKKFGYDVLSKEAISFYGVFDGHGGKNAAVFVRDHLPRVIIEDADFPLELEKVVTRSFLRIDAAFAKPCSLENSLSSGTTALTAIIFGRSLLVANAGDCRAVLSRCGGAIEMSKDHRPFCIKERKRIESLGGFIEDGYLNGQLGVTRALGDWHLEGMKEMSERGGPLSAEPELKLMTLTKEDEFLIIGSDGIWDVFTSQNAVDFARRSLQKHNDVKLCCKEIVEEAIKRESSDNLTVVMVCFHSEPPPPVVVERPRIRRSISAEGLQNLKSLLEG 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0377 374 CDD PP2Cc 76 341 IPR001932 -
Bisa02g0377 374 SMART PP2C_4 66 339 IPR001932 -
Bisa02g0377 374 Gene3D - 58 345 IPR036457 -
Bisa02g0377 374 FunFam Probable protein phosphatase 2C 22 60 344 - -
Bisa02g0377 374 Pfam Protein phosphatase 2C 84 333 IPR001932 -
Bisa02g0377 374 SUPERFAMILY PP2C-like 69 343 IPR036457 -
Bisa02g0377 374 PANTHER PROTEIN PHOSPHATASE 2C 63 339 IPR015655 GO:0004722|GO:0006470
Bisa02g0377 374 ProSitePatterns PPM-type phosphatase domain signature. 115 123 IPR000222 GO:0043169
Bisa02g0377 374 ProSiteProfiles PPM-type phosphatase domain profile. 76 341 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0377 Bisa-ChrBisa02 6374353 6378277 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0377 65 374 PP2C-type Phosphatase Gene Family AT2G25620 61.465 1.20e-137 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Bisa02g0377 PP2C 1.8e-68 CL0238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g0377 02 6374353 6378277 Bisa02g0377 02 6374353 6378277 ECH