Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0370 ATGGGTTCCACCAATAGTCGACTGGGGTCTCGCCCTTCGACCGCCCGAGTCAACGGCACCAATCGCTTTAGATTATCCTCTCTTATCTGCGGTGGCTCCGCCTCCAGCTCCACTTACGAGATGGAAGATCAACCAAGTGAACTTCAAGGAGATTCTCCAACAGACTTTAATGATGAAAATAAAAAAGTCATTGAGGAACCATCTTTATCATGTACAGAGGCTAGAAATAGCTGCCCCCATGCTGAAACTGCAAGTTCATCTGATACCAGAATTGAGTTCAGTGAGATTACTACTGTTGAAGGTTCTTCCAGAAATGTTTCGACTAGTAATCAGAGGAAGTGCTTGACTGAAAGTAAGGAGCTAGTTCCTCCTCATCAGGTAAGTGCTGATCTTAGTCATGATGAATCTTCTAGGGATAGTAGCCACACAGCTAGTACTTCATTTGTAGAACAGCAGTCTTCAGATCCAGTCTCTGTAAATGTTTCTGCTAACAATGATGCAGTCAATAATATTGTTAGTTCAGTGGATAGTGGTGTTTCTCAAATATCTCGGGAGGCAATGTATCCAAGGAGCTCAACCTCTCAAGAGCATGGAGATTACAGATCCAATGAAATTTCTGTTGAGAATCACACTGTTGCAGCTATTCAGGATTCTGAGTTGGATGTTGCTCAAGTTTCCAGTGTACCAGCAGCTTCTGAGTTGCCTGAAAATGAAACTCATCAGGAGACAATACCTTCAGGTTTAGGTTTCCTTGTGTCCAATAGGGAAAGAGGACAGGGAAATGAGAGTGTGTTTCATGTTGATGTTGTCACAATATCTTCCAACATTTTGTCTGGTAGCAATGCTGATGCCAGTGATCATGATGCAAGAAGAGATGGTAGAAGACTGTTTTGGGATGCATTTTCAAGACGTAGTTCCAGAAGATTTGGTGATTCTCCAACCATTGTCTTCTCAGCTGGTGATGCTGATGATCCAAGATCTCAAGATCAATGGCTTCTTGATTTGAGTAATGATTCCTCAAATAATGGGGTTGGAGGTGATTCTGGATACCTGGGAAGTAGAATTCACAGATTAAACGAAAGAATGCGGCACTCGAGATCTGAGATCTGGGAAAGATTTCGTGGTGGCCTTGATGAGATTGGTCGGTTGAATTCTTCCTGTCCGTTAGGACTCCACCCTGATGGCATGTGCTCATGCGAGTCTTTCCCAATGGCTGAGGAATCTAGCACTCGAGCAAGTATATCAAGAATAGCCATGCTTGCTGAAGCTCTATTTGAGGTTTTGGATGAAATCCATCGCCAACCTGTATCACTCTCCCTATCAATGGTCTCTCTCCCAGCGCCAGAATCAATTGTTGACTCATTCCCTCTGAAGTGTCATAAAAAGGTTGATGCAGCTGATGGTGCCATGGATGCTGAACAATGTTACATATGCCTAGCTGAGTATGAAGAAGGGGACAAAATTCGGGTTCTTCCTTGCAACCATGAGTACCACATGTCATGTGTTGATAAGTGGCTAAAAGAAATACATGGTGTGTGTCCTCTCTGTCGTGGGAATGTTTGTGGAGGATCAAACGAGCCTTCTGCCTCAAACACAGAAGTACCTTCTCATTGA 1614 0.4362 MGSTNSRLGSRPSTARVNGTNRFRLSSLICGGSASSSTYEMEDQPSELQGDSPTDFNDENKKVIEEPSLSCTEARNSCPHAETASSSDTRIEFSEITTVEGSSRNVSTSNQRKCLTESKELVPPHQVSADLSHDESSRDSSHTASTSFVEQQSSDPVSVNVSANNDAVNNIVSSVDSGVSQISREAMYPRSSTSQEHGDYRSNEISVENHTVAAIQDSELDVAQVSSVPAASELPENETHQETIPSGLGFLVSNRERGQGNESVFHVDVVTISSNILSGSNADASDHDARRDGRRLFWDAFSRRSSRRFGDSPTIVFSAGDADDPRSQDQWLLDLSNDSSNNGVGGDSGYLGSRIHRLNERMRHSRSEIWERFRGGLDEIGRLNSSCPLGLHPDGMCSCESFPMAEESSTRASISRIAMLAEALFEVLDEIHRQPVSLSLSMVSLPAPESIVDSFPLKCHKKVDAADGAMDAEQCYICLAEYEEGDKIRVLPCNHEYHMSCVDKWLKEIHGVCPLCRGNVCGGSNEPSASNTEVPSH 537
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0370 537 SMART ring_2 475 516 IPR001841 -
Bisa02g0370 537 MobiDBLite consensus disorder prediction 1 22 - -
Bisa02g0370 537 MobiDBLite consensus disorder prediction 34 161 - -
Bisa02g0370 537 PANTHER RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED 1 536 - -
Bisa02g0370 537 MobiDBLite consensus disorder prediction 54 68 - -
Bisa02g0370 537 MobiDBLite consensus disorder prediction 34 53 - -
Bisa02g0370 537 ProSiteProfiles Zinc finger RING-type profile. 475 517 IPR001841 -
Bisa02g0370 537 MobiDBLite consensus disorder prediction 70 116 - -
Bisa02g0370 537 Pfam Ring finger domain 474 517 IPR001841 -
Bisa02g0370 537 SUPERFAMILY RING/U-box 458 520 - -
Bisa02g0370 537 FunFam Putative RING zinc finger domain superfamily protein 442 522 - -
Bisa02g0370 537 MobiDBLite consensus disorder prediction 141 161 - -
Bisa02g0370 537 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 441 521 IPR013083 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bisa02g0370 Bisa-ChrBisa02 6328870 6333382 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0370 384 521 C3H Transcription Factor Family AT5G45290 52.288 1.64e-41 155