Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0368 ATGGCTGGCATGCTTCCTGGAGTAGAGTGTGCTCGAAGGAGGAGGCTACATCAGAGTGGAGGATGCTCTGATTCACCAGCTTCCACCAGACGTTCTTCGTTCTGTCTCTACACTACCAGCCATGTCCATGACCATTCCCTTTCTTCTTCTTCTTCTTCCTCCTCTTTACTGCAGCAAAGAAGCTCACAGCACCAGGCATGCCCAGATGAGATGCTGGGAGGAGCAGCCAGAGAAGCCAAGGAGAGGTTGGATGAGAGATTAAGGGCCCAGAGGAATTCACAAAGCAAAAGGGAAGGGAGGAAGGAGAAGGAGAAGGAGGAGAGAAGAGAAGCAGAGTTGCAGATAGAGGTGTATGGGAGTAAGAGGAGTGGATGCAGAAGATTGATGGGGTGGAGCAGATTGAAATTGAAATGGAAGGGCTCAGACTCAGAAGAAGAGGAGTGTGCAGTGTGCTTGGAGTCATTTGAGGCAGGAGACACACTCATCCATCTTCCCTGTGCCCACAGGTTCCACTCAACTTGCTTGGACCCATGGCTCCAACACAGTGCTCACTGCCCCTGTTGCAGAATGGCCATCATCTCCCACTAG 588 0.5153 MAGMLPGVECARRRRLHQSGGCSDSPASTRRSSFCLYTTSHVHDHSLSSSSSSSSLLQQRSSQHQACPDEMLGGAAREAKERLDERLRAQRNSQSKREGRKEKEKEERREAELQIEVYGSKRSGCRRLMGWSRLKLKWKGSDSEEEECAVCLESFEAGDTLIHLPCAHRFHSTCLDPWLQHSAHCPCCRMAIISH 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0368 195 SMART ring_2 148 188 IPR001841 -
Bisa02g0368 195 Pfam Ring finger domain 147 189 IPR001841 -
Bisa02g0368 195 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 49 190 - -
Bisa02g0368 195 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 126 194 IPR013083 -
Bisa02g0368 195 ProSiteProfiles Zinc finger RING-type profile. 148 189 IPR001841 -
Bisa02g0368 195 MobiDBLite consensus disorder prediction 46 110 - -
Bisa02g0368 195 SUPERFAMILY RING/U-box 137 193 - -
Bisa02g0368 195 MobiDBLite consensus disorder prediction 74 110 - -
Bisa02g0368 195 Coils Coil 96 121 - -
Bisa02g0368 195 MobiDBLite consensus disorder prediction 46 66 - -
Bisa02g0368 195 CDD RING-H2_PA-TM-RING 147 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0368 Bisa-ChrBisa02 6297126 6297885 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0368 38 192 C3H Transcription Factor Family AT1G49850 33.333 1.65e-18 79.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g0368 02 6297126 6297885 Bisa02g0368 02 6297126 6297885 ECH