Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0365 ATGGCTTTTCACGACCATCTACCTCAGGAGCTGCCTTTTCAGCCTTTCACTGACGAGCAACAGTTAAATCAGAACAGGGACATGCAGAGGACGCTGTCGTTCTCCTCCGCCGCATCCGGCGGCGGCGGAGCAGGAGGCCCTGCGCCGACGTGGCTCGGCAATACATCCGGTACCATCCGACAGCAGAATTTCCTCCACCTACAGCCTGACTCGGCGGACGATGGCCGGGGGAGTAGTATGATGCAGTCTTCCGATCACGGTGGCGGAGGAGATCGGAGCCGAGGCGACGGCAATTGCGAATCGGAGGATTTGGCGGAGTACAAGGCTGACATTCTGGGACATCCCCTTTACGACCAGCTGCTGTCGGCTCACGTGTCTTGTCTGAGGATCGCCACTCCGGTGGACCAGCTTCCGAGGATCGACGCTCAGCTCCAGCAGTCACAGCGCGTGCTGGAGAAGTACTCTGGTCTCGGAAACGGGGTCGTCGATGAGAAGGAGCTTGACCAGTTCATGACGCATTATGTTTTATTGCTGTGTGCCTTTAAAGAACAACTGCAACAACATGTACGAGTTCATGCCATGGAAGCAGTTATGGCTTGTTGGGAGCTTGAGCAGTCTCTACAGAGCTTGACTGGTGTGTCTCCGGGTGAAGGGACAGGAGCAACAATGTCGGATGATGAAGATGAGCAGGTAGAGAGCAATGCCAACCTGTATGAAGGAGGTCTTGATGGTGCTGATAGTCTCGGCTTTGGTCCCCTTGTTCCCACTGAAACTGAAAGGTCTTTGATGGAGCGTGTCAGGCAGGAGTTGAAGCATGAATTAAAACAGGGTTACAAGGAGAAGATAGTAGACATAAGAGAAGAGATATTGAGAAAGAGGCGAGCAGGAAAGCTGCCTGGGGACACCACCTCCCTTTTGAAAGCTTGGTGGCAGTCACATTCTAAGTGGCCCTACCCAACTGAGGAAGACAAGGCAAGGTTGGTACAGGAAACAGGGTTGCAATTAAAGCAGATAAATAACTGGTTTATCAATCAAAGGAAAAGGAATTGGCATACTAATCCTTCTTCTTCTACTTCCTCTAAAACCAAGCGCAAGAGTAGTGCAGGTGAAACCAGTAACCAAAGTTTCATGTGA 1134 0.5168 MAFHDHLPQELPFQPFTDEQQLNQNRDMQRTLSFSSAASGGGGAGGPAPTWLGNTSGTIRQQNFLHLQPDSADDGRGSSMMQSSDHGGGGDRSRGDGNCESEDLAEYKADILGHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLQQSQRVLEKYSGLGNGVVDEKELDQFMTHYVLLLCAFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVSPGEGTGATMSDDEDEQVESNANLYEGGLDGADSLGFGPLVPTETERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHTNPSSSTSSKTKRKSSAGETSNQSFM 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0365 377 ProSiteProfiles 'Homeobox' domain profile. 289 352 IPR001356 GO:0003677
Bisa02g0365 377 SMART KNOX1_2 105 149 IPR005540 GO:0003677|GO:0005634
Bisa02g0365 377 MobiDBLite consensus disorder prediction 34 56 - -
Bisa02g0365 377 MobiDBLite consensus disorder prediction 68 100 - -
Bisa02g0365 377 SMART HOX_1 291 356 IPR001356 GO:0003677
Bisa02g0365 377 ProSiteProfiles ELK domain profile. 269 289 IPR005539 GO:0003677
Bisa02g0365 377 SMART ELK_2 269 290 IPR005539 GO:0003677
Bisa02g0365 377 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 86 363 - -
Bisa02g0365 377 Pfam KNOX2 domain 162 211 IPR005541 GO:0003677|GO:0005634
Bisa02g0365 377 Pfam KNOX1 domain 107 148 IPR005540 GO:0003677|GO:0005634
Bisa02g0365 377 CDD homeodomain 292 353 IPR001356 GO:0003677
Bisa02g0365 377 FunFam homeobox protein knotted-1-like 3 isoform X1 290 351 - -
Bisa02g0365 377 SUPERFAMILY Homeodomain-like 291 356 IPR009057 -
Bisa02g0365 377 Gene3D - 295 372 - -
Bisa02g0365 377 SMART KNOX2_2 156 212 IPR005541 GO:0003677|GO:0005634
Bisa02g0365 377 Pfam ELK domain 269 290 IPR005539 GO:0003677
Bisa02g0365 377 MobiDBLite consensus disorder prediction 346 377 - -
Bisa02g0365 377 Pfam Homeobox KN domain 309 348 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0365 Bisa-ChrBisa02 6271791 6276868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0365 51 365 Homeobox Transcription Factor Family AT5G25220 74.164 8.48e-171 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Bisa02g0365 KNOX2 2.7e-19 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g0365 02 6271791 6276868 Bisa02g0365 02 6271791 6276868 ECH