Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0347 ATGATTCCAGAGGACCAAAGGGGTGATTCGGTTGATGAAAATAAGGCCACAGACAAATTCCCTGTGGGCATGAGTGTTCTGGCTGTAGATGACGACCCAATTTGTCTCAAAGTATTGGAGAACCTGCTTCGCAAATGCCAATACCAGGTTACTACGACTAACCAAGCAATTAAGGCCCTCAAAATGTTGAGGGAGAATAGAAACAAGTTTGACCTTGTCATTAGCGACGTCAACATGCCAGACATGGATGGTTTTAAGCTTCTTGAGCTAGTGGGACTTGAAATGGACTTGCCTGTCATCATGTTGTCAGCACACAGTGATACAAGGCTTGTGATGAAGGGTGTCACACATGGCGCATGTGACTATTTGCTGAAACCTGTTAGAATGGAAGAGCTTAAGAACATATGGCAACATGTGGTCCGAAGAAAGAAGTTTGATGGGAAGGATAAGAGTAAGGCTTCCAACAACGAGAAGTCGAGCAGTGTGGCCGGGGAAGGGAATCAAGGCATCATGTCAGAAAATAATCTGGATCAAAATAAAAAGCTGGGCAAGAAAAGGAAGGACCAAGGTGAGGATGAGGAAGAAGATGGTGAAGATAATGGACCAGAGAACGATGAGGACCCGTCATCGCAGAAGAAGCCTCGTGTTGTGTGGTCAGTTGAGCTGCACAGGAAATTTGTTGCTGCAGTTGATCAACTGGGCCTTGATAAGGCTGTTCCCAAGAAAATTCTTGACCTGATGAATGTAGATGGGCTTACAAGGGAAAACGTGGCAAGCCATCTACAGAAATATAGACTCTACCTGAAAAAGGCAACTGATCAAGTTAACATTGTTGCTGCATTGGGTGGTAATGATTCCTCGTACTTGCGGATGGGTTCATTAGAGGGATATGGAGATTTTCGCACCTTGTCTGGGTCAGGAAGGCTCTCATCATCATTTGCATCTAGTGGAATTTTTGGCAGAGTCAACTCCTCGGCTAGCTTGAACTTGAGAGGAATTGGTTCTTCTGGACTGATCCAGCCAGCTCAGTCTCAAAACACAAGCAACTCGATAAACACCTTTGGAAATCTTCAGCCATCATCTATCTTGCCTGCAAATCAAAGATCAGGTGTATTTCGGGGCATTCCAACACCCATAGAGCTTAGCCAATCTCAACCAAGCAACTGTACTACTGGTATTGGGCAGTTAAATTCAATTGATAATTCGGGTGGTTTTGCAGTTGCTAATGGCTTCCTAGACAATAGAGCTAGTGTTGGTAGTGCAAGCAATCCTGTTCCTTGTGTCTCAAGTAACCATTTGATGTTACAAGGAAGCTCACAACAATCTCAAACTATAGGAGCATTTAGAAATCAATCTTCACTGAGAGCTGCTCCTTTAAATTCAGAATCTTTTGATATTGGCGTTTGTAGTTCTTCTAATTTGCTGGATTACACACGGTGCAACGAAAGGTGGCAGGGTGCAGTTCAATTATCTAAATTCCCCTCTAATTCGTTGCCGTTGAACGAGACTTTCAATAATAATCAAGTGCCTCCTAGTAGCTTAAATGTATCTTCCTCCAATACTCACATTGATAACAACCCAGTTCAATTTTCTTCTGCAAGTGCAATTGCCGCTCCATTGGAGGGTCCTAGAGATGAACTGCAATGCCAAGAAGGCTTAATTGGGAATGTTGTTCAGTCTTCAAGTTACACACCAACGCAGAACTGGGAACTACATAAGCAAGATTACAACCAAAACTTGAATTGCACTTTCAATTCTGTAAATCCACTGGTTTCTTCTAATGGAGTCACAAGTTCCTTGGGGCAGAGTCTAAATCAAAATAACGCAATATGCAGCCAAAGGGTGGATGTATCTTTCATCAACCAATTCAATGGGGCTACCCCATCAATCACTCGGTGCAATGAGGCTGAGAAATTCTATTCAGATGCGAGGATGAAGTCGAATGATGCCTACATGTTGGACCAGATGAAGTCCCAAGATTGTTTCATTCAGAGTGTTGGATCTTTTGATGACATAATGAGTGCAATGGTTAAACGGCTTTGTGTTGTTTTGATATTGCAGGAGCAGAACGAGATGATATTGATGGATGGAGAAATGGGATTTGATGGTTACCCTATTGGATCGTGTATCTGA 2133 0.4294 MIPEDQRGDSVDENKATDKFPVGMSVLAVDDDPICLKVLENLLRKCQYQVTTTNQAIKALKMLRENRNKFDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSDTRLVMKGVTHGACDYLLKPVRMEELKNIWQHVVRRKKFDGKDKSKASNNEKSSSVAGEGNQGIMSENNLDQNKKLGKKRKDQGEDEEEDGEDNGPENDEDPSSQKKPRVVWSVELHRKFVAAVDQLGLDKAVPKKILDLMNVDGLTRENVASHLQKYRLYLKKATDQVNIVAALGGNDSSYLRMGSLEGYGDFRTLSGSGRLSSSFASSGIFGRVNSSASLNLRGIGSSGLIQPAQSQNTSNSINTFGNLQPSSILPANQRSGVFRGIPTPIELSQSQPSNCTTGIGQLNSIDNSGGFAVANGFLDNRASVGSASNPVPCVSSNHLMLQGSSQQSQTIGAFRNQSSLRAAPLNSESFDIGVCSSSNLLDYTRCNERWQGAVQLSKFPSNSLPLNETFNNNQVPPSSLNVSSSNTHIDNNPVQFSSASAIAAPLEGPRDELQCQEGLIGNVVQSSSYTPTQNWELHKQDYNQNLNCTFNSVNPLVSSNGVTSSLGQSLNQNNAICSQRVDVSFINQFNGATPSITRCNEAEKFYSDARMKSNDAYMLDQMKSQDCFIQSVGSFDDIMSAMVKRLCVVLILQEQNEMILMDGEMGFDGYPIGSCI 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0347 710 MobiDBLite consensus disorder prediction 146 214 - -
Bisa02g0347 710 SUPERFAMILY Homeodomain-like 211 270 IPR009057 -
Bisa02g0347 710 SMART REC_2 24 136 IPR001789 GO:0000160
Bisa02g0347 710 Gene3D - 209 271 - -
Bisa02g0347 710 Gene3D - 24 161 - -
Bisa02g0347 710 Pfam Myb-like DNA-binding domain 215 265 IPR001005 -
Bisa02g0347 710 SUPERFAMILY CheY-like 23 144 IPR011006 -
Bisa02g0347 710 PIRSF RR_ARR_type-B 4 680 IPR017053 GO:0003677|GO:0003700|GO:0009736
Bisa02g0347 710 Pfam Response regulator receiver domain 26 134 IPR001789 GO:0000160
Bisa02g0347 710 CDD REC_typeB_ARR-like 26 140 - -
Bisa02g0347 710 FunFam Two-component response regulator 209 272 - -
Bisa02g0347 710 MobiDBLite consensus disorder prediction 156 177 - -
Bisa02g0347 710 ProSiteProfiles Response regulatory domain profile. 25 140 IPR001789 GO:0000160
Bisa02g0347 710 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 210 269 IPR017930 -
Bisa02g0347 710 NCBIfam myb-like DNA-binding domain, SHAQKYF class 213 266 IPR006447 GO:0003677
Bisa02g0347 710 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 387 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0347 Bisa-ChrBisa02 5918599 5922056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0347 13 705 Response Regulator Gene Family AT5G58080 40.537 6.16e-126 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Bisa02g0347 Response_reg 8.2e-25 CL0304