Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0330 ATGTCTAACGTACCTCCCTATTTGAGGTTTCCTTTGTTCCAACCTAGTCGATCACCTGAGTGCTTCATAGAGATCCCTCGCCTCCATTCCATTCCGTTTCACCAGAAAGGAGGAAACTTTTTACCTCAAAGCACTACAAAATGGCAGGTTAGACAAGAAGAAGCTGCAGTTGCTGCTGAGGCTTCAGCAACCCTAGGTGAGACTTTGGACATCATGACAGCCTTACAGCTTGTGCTGAGGAAGTCACTCGCTCACGGTGGGCTTGCACGAGGTCTCCATGAAGGTGCTAAGATGATTGAAAAGCATGCTGCTCATCTCTGTGTATTAGCTGAGGACTGTGATCAGCCAGATTATGTTAAACTGGTGAAGGCACTTTGTGCTGACCACAACATCAAGTTGATGACAGTTCCTAGTGCTAAGACTCTTGGTGAATGGGCTGGTTTGTGCAAGATTGATTCTGAGGGCAAAGCAAGGAAAGTAGTTGGTTGCTCCTGTGTCGTTGTGAAGGATTATGGGGAGGAATCACCAGCACTGGATGTTGTTCAGCAATATATCAAATCTCAATAA 567 0.4603 MSNVPPYLRFPLFQPSRSPECFIEIPRLHSIPFHQKGGNFLPQSTTKWQVRQEEAAVAAEASATLGETLDIMTALQLVLRKSLAHGGLARGLHEGAKMIEKHAAHLCVLAEDCDQPDYVKLVKALCADHNIKLMTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEESPALDVVQQYIKSQ 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0330 188 ProSitePatterns Ribosomal protein S12e signature. 74 92 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bisa02g0330 188 PANTHER 40S RIBOSOMAL PROTEIN S12 61 187 - -
Bisa02g0330 188 Gene3D - 53 188 IPR029064 -
Bisa02g0330 188 PRINTS Ribosomal protein S12E family signature 78 91 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bisa02g0330 188 PRINTS Ribosomal protein S12E family signature 92 108 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bisa02g0330 188 PRINTS Ribosomal protein S12E family signature 133 154 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bisa02g0330 188 PRINTS Ribosomal protein S12E family signature 158 171 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bisa02g0330 188 FunFam 40S ribosomal protein S12 54 188 - -
Bisa02g0330 188 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 74 167 IPR004038 -
Bisa02g0330 188 SUPERFAMILY L30e-like 70 186 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0330 Bisa-ChrBisa02 5701016 5703647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0330 67 188 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 72.951 3.09e-65 195