Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0327 ATGATTATGCAGCCTAGTAGCAGAGAGATGCAAGGAATTAACTCCCTCTTGAACTCTTCTCAAATCCCGCTTCAGGACCTCCATAACAGCAACCACCACCAGATCCAACCCTCTCAGATGCATCCCCAACCAGGTGCTCAACAGGAGCTTCACGACGATTTTCTCGAGCAAATACTCTCCAACCTTCCTTCTGGCTCCTGGCCCGACCTCACCCCCAAGCCCTTCTGGGACCTTAATCCGTCCGCCGCCCACGTCAAGCCTGCCGACCTCTCCGACGAGTCCGCGCCGTCCAACGCTGAGAATGCCGCTTTTCAGTACGACGAGCAAGCGAACTTGGCCTCTAAGTTCCAGAACCACCAGATCAGCGGAAGTTCTCCCTCGGCGAAGACCACCGCGGCGGACGCGGCCACTTTGATGCTTCATCGGCAGCTTCTGATGTCCAGAGGAGTTCCCGGCACCGGCGAGTCCGGGCTCCTCCAGATGCCGTTATCTTTGGGTGGAGGAGAATTCGAACCCTCACGGGACGACGTCGTTGACGGTTCATCGTTCAAATCTCATATTCCGGGCGGTGATGATACAGTCCAGGCTCTGTACAACACTTTCGCCGGATCTATGCACGGCACCGGTCAAGCTTCGCACCAGACTCAACATTTCCATCATCCTCAGGGAGGAGCGATGCAGGGGCAGAATTATGGAGCCACAGGGACGGCGACGAACCAAGCTCCGGCGAATGGAACTCCCGCGCAGCCGAAGCAGAGGGTTAGAGCAAGGAGGGGTCAAGCTACGGACCCACATAGCATCGCTGAGAGGTTACGAAGGGAGAGAATCGCAGAAAGAATGAAGGCCCTGCAGGAACTGGTTCCCAATGCCAACAAGACAGACAAAGCCTCGATGCTGGATGAGATAATAGACTATGTGAAGTTCTTACAGCTCCAAGTGAAGGTTCTGAGCATGAGCAGATTGGGCGGTGCAGCTGCTGTGGCTCCCCTTGTTGCTGATATCTCCTCAGAGGGAGGAGGCGACTGCATCCAAGCCACCGCCAGCGGCGGAGACCCCCGAAGCTCAAACGGAAACCAAACGGCGTCATCTTCCAACGACACCCTGACCATGACGGAGCACCAGGTGGCCAAGTTGATGGAAGAAGACATGGGCTCCGCCATGCAATACCTTCAGGGCAAAGGTCTGTGCCTCATGCCCATCTCCCTCGCCACCGCCATCTCCACCGCTACCTGTCATTCCCGGAACCCCTTGATCAACACCACCCCCGCCGCCGGCAACCACCACCCTGCCGTCGCCTCCAACGGCAACGGGGGCGAGGGGCCATCGTCTCCCAGCATGTCGGTCTTGACCGTGCAATCTGCCATGGCGGGCAACGAGGGCGCCGTTAAAGACGCCGCCTCCGTCTCGAAGCCGTGA 1416 0.5798 MIMQPSSREMQGINSLLNSSQIPLQDLHNSNHHQIQPSQMHPQPGAQQELHDDFLEQILSNLPSGSWPDLTPKPFWDLNPSAAHVKPADLSDESAPSNAENAAFQYDEQANLASKFQNHQISGSSPSAKTTAADAATLMLHRQLLMSRGVPGTGESGLLQMPLSLGGGEFEPSRDDVVDGSSFKSHIPGGDDTVQALYNTFAGSMHGTGQASHQTQHFHHPQGGAMQGQNYGATGTATNQAPANGTPAQPKQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADISSEGGGDCIQATASGGDPRSSNGNQTASSSNDTLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRNPLINTTPAAGNHHPAVASNGNGGEGPSSPSMSVLTVQSAMAGNEGAVKDAASVSKP 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0327 471 MobiDBLite consensus disorder prediction 343 368 - -
Bisa02g0327 471 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 260 309 IPR011598 GO:0046983
Bisa02g0327 471 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 258 320 IPR036638 GO:0046983
Bisa02g0327 471 MobiDBLite consensus disorder prediction 205 264 - -
Bisa02g0327 471 Gene3D - 255 317 IPR036638 GO:0046983
Bisa02g0327 471 FunFam Transcription factor bHLH66 257 322 - -
Bisa02g0327 471 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 109 406 - -
Bisa02g0327 471 SMART finulus 266 315 IPR011598 GO:0046983
Bisa02g0327 471 MobiDBLite consensus disorder prediction 421 446 - -
Bisa02g0327 471 MobiDBLite consensus disorder prediction 348 368 - -
Bisa02g0327 471 MobiDBLite consensus disorder prediction 205 247 - -
Bisa02g0327 471 Pfam Helix-loop-helix DNA-binding domain 265 310 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0327 Bisa-ChrBisa02 5638013 5641207 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0327 247 470 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 65.975 2.91e-92 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa02g0327 HLH 1.9e-09 No_clan