Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0323 ATGGCTGACGTGAATCTGGATTTCTTTGACAGGATGATGAGGCTGTGGAAATTCCGGTACTGCTACTGGAAGAGCAGCCAGAGTTTTGTGTTAACAAGGGGTTGGAGCAGGTTTGTGAAGGACAAGAAGTTGAAGGCCAATGATGTGATTGCCTTCTACTTGTGTGAGTTTAAAGAAGCGGGAAAAATGGTGGAGAAGTTCTTCATGATTGACCCTTTGAGGGGAGAAGCAGATAGTGGTGGTGTCTCAGTTTCAGTTATTGAAGGTGCTGATGATCATCACAGCAATGTTGGGTTTGTGAAAAAGCTTGAACAAGAAATGATAAAAACTCACCCACCAAGCAATGTTGATCAGAGGAAAGGGTTTAGACTCTTTGGAGTTCAAATCAATTGA 393 0.4275 MADVNLDFFDRMMRLWKFRYCYWKSSQSFVLTRGWSRFVKDKKLKANDVIAFYLCEFKEAGKMVEKFFMIDPLRGEADSGGVSVSVIEGADDHHSNVGFVKKLEQEMIKTHPPSNVDQRKGFRLFGVQIN 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0323 130 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 4 129 IPR044800 GO:0003700
Bisa02g0323 130 Gene3D - 1 76 IPR015300 -
Bisa02g0323 130 CDD B3_DNA 3 54 IPR003340 GO:0003677
Bisa02g0323 130 SUPERFAMILY DNA-binding pseudobarrel domain 5 58 IPR015300 -
Bisa02g0323 130 Pfam B3 DNA binding domain 7 64 IPR003340 GO:0003677
Bisa02g0323 130 ProSiteProfiles B3 DNA-binding domain profile. 1 71 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0323 Bisa-ChrBisa02 5608768 5609160 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0323 1 129 RAV Transcription Factor Family AT1G50680 44.030 4.67e-29 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa02g0323 B3 1.4e-15 CL0405