Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0314 ATGCCGCTTCACAGTCAGACATCGGACACTGTATTAAAGAGGCTCACCTCCCTCTTCCGAGCCTTGCCCTCTGCGTCCATGCCTGACCTCCAAGCTTCCCACGCTTCCGCAATGCCAAATTCTGAGCCTCGGGATCACGGTGATGGCGACAACGACGAAGGACAACGAGACCAAGAGCAAGAGGTGGGTCAACAGAAACGAGTCTGCGAACAGTTGTCTGGCGAGTCACGGAGTTCTAATTCTAAACCTTCAGATGAGGCGGAACAACCGTCTAGCGAGTTGCGGAGTTCTAAACCTTCAGACGAGGCAGAGTCGAGACAGTCTAATTTAGAAACCCTAGATAAGCCATCTTCCAATGAACCGGTGGTGGTGGCCGATCAGAGTGCCGATTTGCAGGCCGGCTCTACTGCGGGGATGGATGGCAAAGCTGAAAGTAAGGTGATTTCATCGATTGACAACCTCACTCAGGAGCCAATTGGACCTTCAAACAAGGAAATTATTGCAAGAGAAGCCACCCAGGAAGCTCAAAATCAGAAAGAAAATCAACTTCATGTGTCTGTATGTTCACCTCCATTGTCTGAACGATCACCATCTGCTGTTACACAATCTTTATCATCTGTTCCTAGTTCAACTGTGCCAAAACAGAGGCTGTCTTCTCTGAAGGTTGATAATGTGCATGTGCTGGAAGCGGACAGGAAAAATTCTGGTGGTAAAACCTCATCTGCTTTTTCTGTTGCAAGAACACCTGCATCTGATGGATACAACTGGCGGAAGTATGGTCAGAAGCAAGTTAAGAGTCCTACTGGTTCTCGAAGCTATTACAGGTGTACTCATTCAGACTGTTGTGCAAAGAAGGTTGAATGTTGTAATCATTCAGGCCATGTAATAGAGATTGTTTATAAAAGTCAACACAGCCATGAACCTCCACGGAAGATTAACTCCGCCGGGGAAAGTAAGATCATGTCATCGAATGGATCTACTGTAGAAACCAGTGTTCCAGAACAACCCATCAGAGTGCTCAATGATGCAGATCCTTCCCATTCTTCAAAAGAACCTCTACATGAAGTACCATGCAGTGCTGATAGGAAACGACAAAAGTCATCTCGTCATGGTGAGAATGGTAAAGTTATTTCAAAGGAGGAGCATGTTGATGAACCAGAGCTGAAAAGAAGAGTGAAGAAAGGCGGCTTAACAGACCTGGATTCGCACATGAAACCTGGAAAGAAATCTAAGTTAGTTGTACATGCAGCAGGGGCTGTGGGGGTGTCAGGTGATGGATACCGATGGCGTAAGTATGGACAGAAAATGGTCAAGGGGAATCCCCATCCCAGAAATTACTATAGATGCACTTCCGCTGGATGTCCTGTACGTAAGCAGATTGAGACTGCAGTAGATAACTCAGATGCTGTAATCATAACATATAAGGGAGTACATGACCATGACAAGCCTGTGCCTAAGAAACGACAAGGCCCACCAAGTGCTTCTCTTATGGCTGCTGTAGCCCCTACTTCATCAAAAAATTTGCACATCAAGAATACTGATTCACTGCAAAACCAAAAAAGTTCTACTCAATTTTCAGTGGACACTGAAGGAGAACTAACTGGAGAAGCCTCGGACCTCGGGGGTGAGAAAGCTATTGAGTCAGCTCGAACTCTTCTGAGCATTGGCATTGAAATCAAGCCTTGCTGA 1689 0.4612 MPLHSQTSDTVLKRLTSLFRALPSASMPDLQASHASAMPNSEPRDHGDGDNDEGQRDQEQEVGQQKRVCEQLSGESRSSNSKPSDEAEQPSSELRSSKPSDEAESRQSNLETLDKPSSNEPVVVADQSADLQAGSTAGMDGKAESKVISSIDNLTQEPIGPSNKEIIAREATQEAQNQKENQLHVSVCSPPLSERSPSAVTQSLSSVPSSTVPKQRLSSLKVDNVHVLEADRKNSGGKTSSAFSVARTPASDGYNWRKYGQKQVKSPTGSRSYYRCTHSDCCAKKVECCNHSGHVIEIVYKSQHSHEPPRKINSAGESKIMSSNGSTVETSVPEQPIRVLNDADPSHSSKEPLHEVPCSADRKRQKSSRHGENGKVISKEEHVDEPELKRRVKKGGLTDLDSHMKPGKKSKLVVHAAGAVGVSGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKQIETAVDNSDAVIITYKGVHDHDKPVPKKRQGPPSASLMAAVAPTSSKNLHIKNTDSLQNQKSSTQFSVDTEGELTGEASDLGGEKAIESARTLLSIGIEIKPC 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0314 562 MobiDBLite consensus disorder prediction 110 134 - -
Bisa02g0314 562 Gene3D WRKY domain 408 484 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa02g0314 562 Gene3D WRKY domain 237 310 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa02g0314 562 Pfam WRKY DNA -binding domain 252 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa02g0314 562 Pfam WRKY DNA -binding domain 425 480 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa02g0314 562 MobiDBLite consensus disorder prediction 169 214 - -
Bisa02g0314 562 SMART WRKY_cls 250 308 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa02g0314 562 SMART WRKY_cls 423 482 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa02g0314 562 MobiDBLite consensus disorder prediction 41 64 - -
Bisa02g0314 562 MobiDBLite consensus disorder prediction 301 404 - -
Bisa02g0314 562 ProSiteProfiles WRKY domain profile. 418 483 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa02g0314 562 FunFam WRKY transcription factor 409 484 - -
Bisa02g0314 562 MobiDBLite consensus disorder prediction 344 404 - -
Bisa02g0314 562 SUPERFAMILY WRKY DNA-binding domain 420 483 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa02g0314 562 SUPERFAMILY WRKY DNA-binding domain 247 309 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa02g0314 562 MobiDBLite consensus disorder prediction 316 334 - -
Bisa02g0314 562 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 182 521 IPR044810 GO:0003700
Bisa02g0314 562 MobiDBLite consensus disorder prediction 88 109 - -
Bisa02g0314 562 ProSiteProfiles WRKY domain profile. 245 309 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa02g0314 562 MobiDBLite consensus disorder prediction 25 214 - -
Bisa02g0314 562 MobiDBLite consensus disorder prediction 65 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0314 Bisa-ChrBisa02 5404186 5427712 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0314 241 562 WRKY Transcription Factor Family AT4G30935 61.231 1.90e-124 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa02g0314 WRKY 1.5e-23 CL0274