Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0305 ATGTCTATAATTTTGTTCAACAGGTTGTCTCCCCCTACTTCCTCTCCGTATTGCCCGTTTCGTTCAATCACATCTACCGGAAGATCGCGTATTTGTCTTCAAGGTCAGTTTATTCATTTGTCCAACTCATATTTTGATAAAAATCAGCTTGGAGTTCAGATTTACTTCGGTCTTTTGCATGTGGTTGAGACTGTAACTTATGCTGCTATTGGGAGTCGTACATATGTGCTATATGTGATCAGCTTTTCAAAGATGTTTGACTGTGGTTACAACTACAAGTCACAATACATGAGTGGCCAGCGGGAAAAATTTCTGAGGCTGGATGACTTGGACTCTAGACTATCATCACCTTCTGACGTTGGAGTTAAAAAATGTGCGTTTAGTACTGTTAAATTAAGCCATGTTGGTCATGCAAGTAGTGGAACCACTGGATCTTTTAAAAGAGGAATGAAAAAGGGATCTGAAGGACTGAAGTCAATTGGTCGATCACTTAGATTTGGGGTATCTAGGGCAGTCTTCCCAGAAGACCTTAAAGTGTCAGAGAAGAAGATTTTTGATCCTCAAGACACATTTTTGCTCTTATGGAATAGGCGTTTTGTTATCTCATGCATTTTGGCTGTCTCCATTGATCCATTGTTTTTCTATCTACCTGTCATCAATGATTCATTAAACTGTCTTGGAATTGATCGCAAGTTGGCAATCATAGTCACCACCCTGAGGACGGTTATTGATGCTTTCTATCTTATACACATGGCTCTCCAATTTCGTACTGCTTATATAGCTCCATCATCTCGTGTCTTTGGACGGGGTGAGCTTGTGATAGATGCATCACAGATAGCCAAGCGATACATGCGGCGATATTTCATTGTCGATTTTCTATCTGTGTTGCCCTTGCCACAGATTGTAGTTGGGAGGTTTCTTCAGAGGTCAAAAGGTTCTGATGTTCTGGCAACAAAACAGGCCTTGCTGTTCATTATCTTACTTCAGTATGTTCCTAGATTTCTCCGGATGGTACCATTGACTTCAGAACTTAAGAGAACAACTGGTGTCTTTGCTGAAACAGCATGGGCAGGTGCTGCATATTATTTGCTATTATACATGCTTGCCAGTCATATAGTTGGAGCTTTTTGGTACTTGTTAGCTATTCAGCGCAATGACTCATGCTGGCAGAAGGCTTGTAGTGAAAATGGGTGCAATAAAAATTTCTTGTATTGTGGCAACCAGCACATGGAAGGTTTTAGTGCCTGGCAGAATATAAGTGAAGGTATTCTCAAGTCAAAGTGCTCTGCCGATGATGACAATTCACCTTTTGATTATGGAATTTTCACGCAAGCATTTTCATCTGGCATTGTTTCATCTAAAAAGTTCATCTCCAAATACTGTTACTGTTTATGGTGGGGGCTTCAGAATTTGAGTACACTTGGCCAGGGGCTTCAAACCAGCACGTATCCTGGGGAGGTTATATTTTCAATAGCGCTAGCCATTTTTGGGCTAATCCTTTTTGCTCTTCTGATTGGTAACATGCAGACTTACCTCCAGTCTCTTACTATTAGGCTTGAGGAAATGAGAGTAAAAAGGCGTGATTCAGAACAGTGGATGCATCATCGCTTGCTCCCCCATGAACTTAGAGAACGCGTTAGACGCTATGATCAATATAAGTGGTTGGCAACACGTGGTGTAGATGAAGAAAGTTTGGTTCAGAGTTTACCAAAGGATCTTAGAAGAGATATTAAGCGACATCTCTGCCTGGCTTTAGTTAGAAGGGTTCCGCTATTCGAGAGTATGGATGAAAGGTTGCTTGATGCAATTTGTGAGAGACTGAAACCATGCTTATTTACAGAGAATACTTACATTGTTCGAGAAGGAGATCCAGTTGATGAGATGCTTTTCATCATACGTGGTCGTCTTGAGAGTGTTACCACAGATGGTGGGAGAAGTGGATTTTTTAACCGGAGTTTCCTAAAAGAGGCAGACTTCTGTGGTGAGGAGCTTTTAACGTGGGCGCTGGATCCCAAATCTGGCTCCAACCTTCCGTCTTCTACTAGAACAGTTAAGGCATTAACAGAGGTTGAGGGTTTTGCCTTGATTGCTGAAGAGTTAAAATTTGTTGCAAGTCAATTTAGGCGCCTCCACAGTAGACAGGTTCAACACACCTTCCGCTTTTATTCACAACAATGGAGAACTTGGGCTGCATGCTTTATTCAAGCAGCCTGGCGTCGTTATTCTAAGAGGAAGATTATGGAGCTTCGTCGCAAAGAAGAATCTGAGGAATCAGAAGGAACCCGCACCAATGCAAGTGGCGGTTCATACAGTCTTGGTGCCACCCTCTTAGCCTCCAGATTTGCAGCCAATGCCCTTCGTGGTGTACATCGCAATAGGAATGCGAAGACTGCTAGAGAGTTGGTGAAACTACAAAAACCTCCAGAACCTGACTTCACTGCAGATGATGCAGACTAA 2457 0.4229 MSIILFNRLSPPTSSPYCPFRSITSTGRSRICLQGQFIHLSNSYFDKNQLGVQIYFGLLHVVETVTYAAIGSRTYVLYVISFSKMFDCGYNYKSQYMSGQREKFLRLDDLDSRLSSPSDVGVKKCAFSTVKLSHVGHASSGTTGSFKRGMKKGSEGLKSIGRSLRFGVSRAVFPEDLKVSEKKIFDPQDTFLLLWNRRFVISCILAVSIDPLFFYLPVINDSLNCLGIDRKLAIIVTTLRTVIDAFYLIHMALQFRTAYIAPSSRVFGRGELVIDASQIAKRYMRRYFIVDFLSVLPLPQIVVGRFLQRSKGSDVLATKQALLFIILLQYVPRFLRMVPLTSELKRTTGVFAETAWAGAAYYLLLYMLASHIVGAFWYLLAIQRNDSCWQKACSENGCNKNFLYCGNQHMEGFSAWQNISEGILKSKCSADDDNSPFDYGIFTQAFSSGIVSSKKFISKYCYCLWWGLQNLSTLGQGLQTSTYPGEVIFSIALAIFGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPHELRERVRRYDQYKWLATRGVDEESLVQSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRSFLKEADFCGEELLTWALDPKSGSNLPSSTRTVKALTEVEGFALIAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKIMELRRKEESEESEGTRTNASGGSYSLGATLLASRFAANALRGVHRNRNAKTARELVKLQKPPEPDFTADDAD 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0305 818 Gene3D - 199 516 - -
Bisa02g0305 818 SMART cnmp_10 591 722 IPR000595 -
Bisa02g0305 818 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 175 812 - -
Bisa02g0305 818 SUPERFAMILY Voltage-gated potassium channels 186 513 - -
Bisa02g0305 818 Pfam Ion transport protein 195 517 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bisa02g0305 818 FunFam Cyclic nucleotide-gated ion channel 1 589 707 - -
Bisa02g0305 818 MobiDBLite consensus disorder prediction 796 818 - -
Bisa02g0305 818 FunFam Cyclic nucleotide-gated ion channel 1 518 582 - -
Bisa02g0305 818 CDD CAP_ED 591 722 IPR000595 -
Bisa02g0305 818 Gene3D Jelly Rolls 589 709 IPR014710 -
Bisa02g0305 818 ProSiteProfiles IQ motif profile. 727 756 IPR000048 GO:0005515
Bisa02g0305 818 SUPERFAMILY cAMP-binding domain-like 520 708 IPR018490 -
Bisa02g0305 818 Gene3D Helix hairpin bin 519 582 - -
Bisa02g0305 818 ProSiteProfiles cAMP/cGMP binding motif profile. 591 675 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0305 Bisa-ChrBisa02 5276240 5286660 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0305 85 816 Ion Channels AT2G23980 75.603 0.0 1154