Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0298 ATGGGATTATCATTGCAAATCCAAAGCAAAGGCCACTGTGTCTACCATCATCATCACGTCTTCGTTCTCCTGTTTCTTTGCCTATGGTTGATCTCATCATCGTCTTCTTGGGCGAGATCTGTGGAGCAAGAGGAAGATCGAATCAGAGAGCTTCCGGGACAGCCACGTGTGAGTTTCAGTCAATTCTCCGGTTACGTCGCAGTGAACGACCGACACGGCCGAGCACTGTTCTACTGGTTCACGGAGGCCGCCACTTCCCCACACACTAAGCCTCTCCTTCTCTGGCTCAATGGAGGGCCTGGTTGTTCATCAGTGGCATATGGGGCATCAGAGGAAATTGGACCATTTCGTATAAACAAAACCGGTTCTTCTCTGTATCTTAACAAATATGCGTGGAACAGAGAGGCAAATATCCTCTTTCTTGAATCGCCTGCTGGTGTTGGTTTCTCCTATACAAATACAAGTTCGAACCTCAAAACTTCTGGGGACAGAAGGACAGCTCAGGATTCTCTGATTTTTCTAATTAGATGGATGTCAAGGTTTCCACAATACAAATACAGAGACTTTTACATCGCTGGGGAAAGCTATGCAGGGCATTACATTCCTCAGTTGGCTAAGCAAATATATGATTACAATAAAGAAAATCCCCATATTATTAATCTCAAAGGGTTCATTGTTGGAAATGCAGTGACTGATAACTACTATGATGGGATTGGAACTGTCACATATTGGTGGAGCCATTCTATGATATCTGATCTTTCATACCAATCAATCCTCAAATACTGCAATTTCACATCAGAAAAAACTTCTAAAAAATGTGATGCTGCAGTGAGTTATGCGGTTAACCATGAATTTGGAAACATTGATCAGTACAGTATTTATACTCCAACATGCCCAACACCGCATAACAATACTATACGTTACATACGGCTCAAGGGTACAATTTTACATAGGAGATCAGGATATGATCCATGTACTGAAGATTATGCAGAAAAATATTATAATCGTCCTGATGTGCAGAAAGCAATGCATGCAAACGTTACAAATATCCCTTACAAGTGGACTGCTTGCAGCGATGTGCTCATAAAAAGCTGGAAGGATACTGCAGTTTCTGTTTTGCCAATATACAGAGAGTTGATAGCAGCTGGTCTAAGAATCTGGGTTTTCAGCGGGGACACAGATTCTGTGGTTCCAGTGACAGCCACTAGGTTTTCCCTCAACCATCTCAACCTCACCATTAAAACTCGTTGGTACCCATGGTACTCTGGTCGACAGGTAGGTGGATGGACAGAGGTGTATGAAGGACTAACCTTTGCAACAGTAAGAGGAGCTGGACACGAAGTGCCATTGTTTCAGCCAAAGCGAGCATTCACACTCTTAAGATCCTTCTTGGCAGGGAAGGACCTACCAAAATCTTAA 1419 0.4313 MGLSLQIQSKGHCVYHHHHVFVLLFLCLWLISSSSSWARSVEQEEDRIRELPGQPRVSFSQFSGYVAVNDRHGRALFYWFTEAATSPHTKPLLLWLNGGPGCSSVAYGASEEIGPFRINKTGSSLYLNKYAWNREANILFLESPAGVGFSYTNTSSNLKTSGDRRTAQDSLIFLIRWMSRFPQYKYRDFYIAGESYAGHYIPQLAKQIYDYNKENPHIINLKGFIVGNAVTDNYYDGIGTVTYWWSHSMISDLSYQSILKYCNFTSEKTSKKCDAAVSYAVNHEFGNIDQYSIYTPTCPTPHNNTIRYIRLKGTILHRRSGYDPCTEDYAEKYYNRPDVQKAMHANVTNIPYKWTACSDVLIKSWKDTAVSVLPIYRELIAAGLRIWVFSGDTDSVVPVTATRFSLNHLNLTIKTRWYPWYSGRQVGGWTEVYEGLTFATVRGAGHEVPLFQPKRAFTLLRSFLAGKDLPKS 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0298 472 Gene3D alpha/beta hydrolase 42 300 IPR029058 -
Bisa02g0298 472 FunFam Carboxypeptidase 372 466 - -
Bisa02g0298 472 SUPERFAMILY alpha/beta-Hydrolases 43 470 IPR029058 -
Bisa02g0298 472 ProSitePatterns Serine carboxypeptidases, histidine active site. 436 453 IPR033124 GO:0004185
Bisa02g0298 472 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 48 453 IPR001563 GO:0004185|GO:0006508
Bisa02g0298 472 Gene3D - 372 466 - -
Bisa02g0298 472 ProSitePatterns Serine carboxypeptidases, serine active site. 191 198 IPR018202 GO:0004185
Bisa02g0298 472 Gene3D - 325 362 - -
Bisa02g0298 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 141 151 IPR001563 GO:0004185|GO:0006508
Bisa02g0298 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 436 449 IPR001563 GO:0004185|GO:0006508
Bisa02g0298 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 140 IPR001563 GO:0004185|GO:0006508
Bisa02g0298 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 177 202 IPR001563 GO:0004185|GO:0006508
Bisa02g0298 472 Pfam Serine carboxypeptidase 53 465 IPR001563 GO:0004185|GO:0006508
Bisa02g0298 472 FunFam Carboxypeptidase 42 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0298 Bisa-ChrBisa02 5215514 5221677 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0298 330 469 Calmodulin-binding Proteins AT2G22960 29.078 8.34e-14 68.2