Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0287 ATGGAGGCCAGTGCTGGACTGGTCGCTGGCTCTCACAATCGCAACGAGCTCGTTGTCATTCATGGCCATGAAGAGCCCAAAGGATTGAAGAAGTTGGATGGAGAGATGTGTGAGATATGTGGGGATGGGGTGGGAGTCACGGTAGAGGGAGAGTTGTTTGTGGCCTGCAATGAGTGTGGCTTTCCGGTGTGCCGGCCGTGCTATGAGTACGAGCGACGAGAAGGTAGCCAACATTGCCCGCAATGCAAGACCAAATACAAACGTCTCAAAGGGAGTCCAAGGGTGGAGGGAGATGAAGACGAAGAAGATGTCGATGATATCGAACATGAATTCAATGTGGAACATCAAAACAAGAACCCTAATAACCATGATGCAGTAGAAGCCATGCTTCATGCCAAGATAAGCTATGGAAGAGGCCTTGACCACGACGACAATCCCCAGTTCTCAACTAAGAGTGGAGAGTTCCCAATAGCATCTCACAATTATGGAGAGGAAATGCTATCTTCTTCATTGCATAAACGAGTACATCCCTATCCAGTCTCTGAACCTGGAAGTGAAAGATGGGATGAAAAGAAACATGATGACTGGAAATTGCAGCAAGGCAACTTGGGGCCTGAACCTGATGAAGACCCTGATGCAGCCATGTTAGATGAAGCAAGACAGCCATTGTCGAGGAAGGTGGCAATAGCGTCGAGCAAGATCAATCCGTACAGGATGGTCATTGTGGCACGTCTTGTGATCCTTGCCTTCTTCCTGCGTTACAGAATCATGAATCCAGTTCATGACGCCATTGGTTTATGGCTTACCTCTATTGTTTGTGAAATCTGGTTTGCTTTCTCTTGGATCCTCGATCAATTTCCCAAATGGTTTCCTATTGATCGACAAACCTATCTTGACCGTCTCTCAGTCAGGTACGAGCGGGAAGGAGAGCCCAACATGCTGGCTCCAGTGGATTTCTTTGTGAGTACTGTGGATCCCATGAAAGAACCTCCTCTGGTGACAGCCAACACTATACTTTCAATCTTGGCCGTCGATTATCCAGTCGATAAAGTCTCTTGCTACATCTCTGACGATGGAGCTTCCATGTGCACCTTTGAAGCTCTGTCAGAAACTGCAGAGTTTGCGAGGAAATGGGTTCCATTTTGCAAGAAATTCTCCATAGAACCTCGCGCACCAGAGATGTACTTCTGTGACAAGATCGATTACCTCAAGGACAAAGTCCACCCCACCTTTGTTAAGGAGCGTCGTGCTATGAAGAGAGAATATGAAGAATTTAAGGTTAGGATCAATGCACTTGTAGCCAAAGCCCAGAAGGTTCCCCCAGGAGGGTGGATAATGCAGGATGGAACACCGTGGCCTGGAAACAACACAAAGGATCATCCTGGTATACTTCAAGTCTTCCTTGGTCACAATGGAGGCTTTGATGCAGAAGGAAACCAGCTTCCTCGTCTCGTCTATGTTTCCCGAGAGAAAAGGCCTGGTTTTCAACACCACAAGAAAGCTGGTGCCATGAATGCTCTGATTCGTGTCTCGGCGGTGCTCACAAATGCTCCTTTCATTTTGAACTTGGACTGTGATCATTATGTGAATAACAGCAAGGCAGTCCGAGAGGCCATGTGCTTCTTGATGGATCCCCAAATTGGAAAGAAGGTCTGCTATGTGCAATTTCCTCAGAGATTTGATGGCATTGACAGGCATGATCGTTATGCCAACAGGAACACAGTTTTCTTTGATATTAACATGAAGGGTCTAGATGGTATTCAGGGTCCTGTATATGTAGGTACAGGGTGTGTCTTCAGGAGGCAAGCTTTGTTTGGGTATAATCCTCCGAAGGGTCCCAAACGCCCAAAAATGGTAAGCTGTGACTGCTGCCCATGTTTTGGACGCCGTAAAAAGCTCAAGTATTCAAAGGATGATGCAAATGGAGAGGCAGCTAGGCTACAAGGAATGGATGATGACAAAGAGTTACTAATGTCCCAAATGAATTTTGAGAAGAAGTTTGGGCAGTCATCTATATTTGTGACTTCAACTCTAATGGAAGAGGGTGGTGTGCCTCCTTCCTCAAGTCCTGCAGCTCTGCTTAAAGAAGCCATTCATGTCATCAGTTGTGGCTATGAAGACAAAACTGAATGGGGAACTGAGCTAGGTTGGATCTATGGGTCTATTACTGAGGATATTCTAACAGGTTTCAAGATGCATTGCCGTGGATGGAGGTCTATTTACTGTATGCCAAAAAGACCTGCATTCAAGGGCACTGCTCCTATCAACTTGTCAGATCGGTTGAATCAGGTGCTTCGTTGGGCACTTGGCTCCATTGAGATCTTCTTTAGTCACCATTGCCCTGCATGGTATGGCTACAAGGGAGGGAATAAGCTTAAGTGGCTCGAGCGATTATCTTATGTGAACACAACAATCTACCCTTTCACATCCATACCTCTGGTTGCATATTGCCTTCTTCCAGCCATTTGCTTACTGACTGACAAATTCATCATGCCACCGATAAGCACTTTTGCTGGTTTATACTTCATTTCCCTTTTCTCTTCAATCATGGCAACGGGCATTCTCGAGCTCAAATGGAGTGGTGTTAGCATTGAGGAATGGTGGAGAAATGAGCAATTCTGGGTCATTGGTGGTGTATCAGCACATCTCTTTGCTGTCATACAAGGTCTTCTGAAGGTTTTGGCTGGAATAGACACCAACTTCACTGTCACTTCCAAGGCATCAGATGATGAGGACTTTGGGGAACTATACACCTTTAAATGGACCACTCTGCTAATTCCTCCAACTACCATTCTAGTCATCAATATTGTTGGGGTTGTGGCTGGAATCTCAGATGCCATAAACAATGGGTACCAATCCTGGGGACCCCTATTTGGAAAGCTATTCTTTTCCTTCTGGGTGATTGTTCATCTCTATCCATTCCTGAAAGGTCTGATGGGCCGGCAAAACCGAACACCCACCATTGTTGTGATATGGTCAGTGCTGTTGGCTTCTATTTTCTCCTTGCTTTGGGTAAGAATTGACCCATTTGTGATGAAAACCAAGGGACCTGATACCAAGCTATGTGGAATCAACTGCTGA 3081 0.4593 MEASAGLVAGSHNRNELVVIHGHEEPKGLKKLDGEMCEICGDGVGVTVEGELFVACNECGFPVCRPCYEYERREGSQHCPQCKTKYKRLKGSPRVEGDEDEEDVDDIEHEFNVEHQNKNPNNHDAVEAMLHAKISYGRGLDHDDNPQFSTKSGEFPIASHNYGEEMLSSSLHKRVHPYPVSEPGSERWDEKKHDDWKLQQGNLGPEPDEDPDAAMLDEARQPLSRKVAIASSKINPYRMVIVARLVILAFFLRYRIMNPVHDAIGLWLTSIVCEIWFAFSWILDQFPKWFPIDRQTYLDRLSVRYEREGEPNMLAPVDFFVSTVDPMKEPPLVTANTILSILAVDYPVDKVSCYISDDGASMCTFEALSETAEFARKWVPFCKKFSIEPRAPEMYFCDKIDYLKDKVHPTFVKERRAMKREYEEFKVRINALVAKAQKVPPGGWIMQDGTPWPGNNTKDHPGILQVFLGHNGGFDAEGNQLPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFILNLDCDHYVNNSKAVREAMCFLMDPQIGKKVCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALFGYNPPKGPKRPKMVSCDCCPCFGRRKKLKYSKDDANGEAARLQGMDDDKELLMSQMNFEKKFGQSSIFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGTAPINLSDRLNQVLRWALGSIEIFFSHHCPAWYGYKGGNKLKWLERLSYVNTTIYPFTSIPLVAYCLLPAICLLTDKFIMPPISTFAGLYFISLFSSIMATGILELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKASDDEDFGELYTFKWTTLLIPPTTILVINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKLCGINC 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0287 1026 SUPERFAMILY RING/U-box 22 109 - -
Bisa02g0287 1026 Pfam Cellulose synthase 317 1020 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bisa02g0287 1026 FunFam Cellulose synthase 19 110 - -
Bisa02g0287 1026 Coils Coil 415 435 - -
Bisa02g0287 1026 CDD mRING-HC-C4C4_CesA 35 85 - -
Bisa02g0287 1026 FunFam Cellulose synthase 434 608 - -
Bisa02g0287 1026 MobiDBLite consensus disorder prediction 179 199 - -
Bisa02g0287 1026 SUPERFAMILY Nucleotide-diphospho-sugar transferases 330 842 IPR029044 -
Bisa02g0287 1026 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 220 993 - -
Bisa02g0287 1026 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 110 IPR013083 -
Bisa02g0287 1026 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
Bisa02g0287 1026 MobiDBLite consensus disorder prediction 175 211 - -
Bisa02g0287 1026 ProSiteProfiles Zinc finger RING-type profile. 37 83 IPR001841 -
Bisa02g0287 1026 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 457 608 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0287 Bisa-ChrBisa02 5089979 5099498 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0287 1 1026 Cell Wall Biosynthesis AT5G17420 84.109 0.0 1796