Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0286 ATGGAAGCCAGCGCTGGACTCGTCGCTGGCTCTCACAATCGCAATGAGCTCGTCGTTATTCATTCCCATGAAGAGCCCAAAGGATTGAAGAAGTTGGATGGAGAGATGTGTGAGATATGTGGGGATGGGGTGGGAGTCACGGTAGAAGGAGAGTTGTTTGTGGCTTGCAATGAGTGTGGCTTTCCGGTGTGCCGGCCGTGCTATGAGTACGAGCGACGGGAAGGTAGCCAACATTGCCCGCAATGCAAGACCAAATACAAGCGTCTCAAAGGGAGTCCGAGGGTGGAGGGAGATGAAGACGAAGAAGACGTGGATGATATCGAACATGAATTCAACGTGGAACATCAAAACAAGAACCCTAATAATGTTGCAGTAGAAGCCATGCTTCATGCCAAGATGAGCTATGGAAGAGGCCCTGAAGACCATGACAATCCTCCATTCCCACCTGTCAGTGGAGAGTTCCCGATAACATCTCACAACTATGGAGACGAAGTGTTATCTTCTTCGTTGCATAAACGAGTTCATCCCTATCCACTCTCTGAACCTGGAAGTGAAAGATGGGATGAAAAGAAGCATGATGACTGGAAATTGCAGCAAGGCAACTTGGGGCCTGAGCCTGATGAAGATCCTGATGCAGCCATGTTAGATGAAGCAAGGCAGCCGCTATCGAGGAAAGTGGCAATAGCGTCGAGCAAGATCAATCCGTACAGGATGGTCATTGTGGCACGACTTGTGATCCTTGCCTTCTTCCTGCGTTATAGAATCATGAACCCAGTTCATGATGCCATTGGGTTATGGCTTACCTCTATTATCTGTGAAATCTGGTTTGCTTTCTCTTGGATTCTCGATCAGTTTCCTAAATGGTTTCCTATTGACCGACAAACTTATCTCGACCGTCTCTCAATTAGATACGAGCGGGAAGGAGAGCCCAACATGCTGGCTCCAGTGGATTTCTTTGTGAGTACTGTGGATCCCATGAAAGAACCTCCTCTGGTGACAGCCAACACTATACTTTCAATCTTGGCCGTCGATTATCCAGTCGATAAAGTCTCTTGCTACATCTCTGACGATGGAGCTTCCATGTGCACCTTTGAAGCTCTGTCAGAAACTGCGGAGTTTGCGAGGAAATGGGTTCCATTTTGCAAGAAATTCTCCATAGAACCTCGCGCACCAGAGATGTACTTCTGTGACAAGATCGATTACCTCAAGGACAAAGTCCACCCCACCTTTGTTAAGGAGCGTCGTGCTATGAAGAGAGAATATGAAGAATTTAAGGTTAGGATCAATGCACTTGTAGCCAAAGCCCAGAAGGTTCCCCCAGGAGGGTGGATAATGCAGGATGGAACACCGTGGCCTGGAAACAACACAAAGGATCATCCTGGTATACTTCAAGTCTTCCTTGGTCACAATGGAGGCTTTGATGCAGAAGGAAACCAGCTTCCTCGTCTCGTCTATGTTTCCCGAGAGAAAAGGCCTGGTTTTCAACACCACAAGAAAGCTGGTGCCATGAATGCTCTGATTCGTGTCTCGGCGGTGCTCACAAATGCTCCTTTCATTTTGAACTTGGACTGTGATCATTATGTGAATAACAGCAAGGCAGTCCGAGAGGCCATGTGCTTCTTGATGGATCCCCAAATTGGAAAGAAGGTCTGCTATGTGCAATTTCCTCAGAGATTTGATGGCATTGATAGGCATGATCGTTATGCCAATAGGAACACAGTTTTCTTCGATATTAACATGAAGGGTCTGGATGGTATTCAGGGTCCTGTATATGTGGGCACAGGGTGTGTCTTTAGGAGGCAAGCTTTGTATGGCTATAATCCTCCCAAGGGTCCTAAACGCCCAAAAATGGTAAGCTGTGACTGCTGCCCATGTTTCGGACGCCGCAAGAAGCTCAAGTATGCAAAGGATGATGCAAATGGAGATGATGCTAGGCTACAAGGAACGGATGATGACAAAGAGTTACTAATGTCCCAAATGAATTTTGAGAAGAAGTTTGGGCAGTCATCTATATTTGTGACTTCAACTCTAATGGAAGAGGGTGGTGTGCCTCCTTCCTCAAGTCCTGCAGCTCTGCTTAAAGAAGCCATTCATGTCATCAGTTGTGGCTATGAAGACAAAACTGAATGGGGAACTGAGCTAGGTTGGATCTATGGGTCTATTACAGAGGATATTCTAACAGGTTTCAAGATGCATTGCCGTGGATGGAGGTCTATTTACTGTATGCCAAAAAGACCTGCATTCAAGGGCACTGCTCCTATCAACTTGTCAGATCGGTTGAATCAGGTGCTTCGTTGGGCACTTGGCTCCATTGAGATCTTCTTTAGTCACCATTGCCCTGCATGGTATGGCTACAAGGGAGGGAATAAGCTCAAGTGGCTCGAGCGATTATCTTATGTGAACACAACAATCTACCCTTTCACATCCATACCTCTGGTTGCATACTGCCTTCTTCCAGCCATTTGCTTACTGACTGACAAATTCATCATGCCACCGATAAGCACTTTTGCTGGTTTATACTTCATTGCCCTTTTCTCTTCAATCATGGCAACGGGCATTCTCGAGCTCAAATGGAGTGGCGTTAGCATTGAGGAATGGTGGAGAAATGAGCAATTCTGGGTCATTGGTGGTGTATCGGCACATCTCTTTGCTGTCATACAAGGTCTTCTGAAGGTTTTGGCTGGAATAGACACCAACTTCACTGTCACTTCCAAGGCATCAGATGATGAGGATTTTGGGGAACTATACACCTTTAAATGGACCACTCTGCTAATTCCTCCAACCACCATTCTAGTCATCAATATTGTTGGGGTTGTGGCTGGAATCTCAGATGCCATAAACAATGGGTACCAATCCTGGGGACCCCTATTTGGAAAGCTATTCTTTTCCTTCTGGGTGATTGTTCATCTCTATCCATTCCTGAAAGGTCTGATGGGCCGGCAAAACCGAACACCCACCATTGTTGTGATATGGTCAGTGCTGTTGGCTTCTATTTTCTCCTTGCTTTGGGTAAGAATCGACCCATTTGTGATGAAAACCAAGGGACCCGATACCAAGCTATGTGGAATCAACTGCTGA 3078 0.4639 MEASAGLVAGSHNRNELVVIHSHEEPKGLKKLDGEMCEICGDGVGVTVEGELFVACNECGFPVCRPCYEYERREGSQHCPQCKTKYKRLKGSPRVEGDEDEEDVDDIEHEFNVEHQNKNPNNVAVEAMLHAKMSYGRGPEDHDNPPFPPVSGEFPITSHNYGDEVLSSSLHKRVHPYPLSEPGSERWDEKKHDDWKLQQGNLGPEPDEDPDAAMLDEARQPLSRKVAIASSKINPYRMVIVARLVILAFFLRYRIMNPVHDAIGLWLTSIICEIWFAFSWILDQFPKWFPIDRQTYLDRLSIRYEREGEPNMLAPVDFFVSTVDPMKEPPLVTANTILSILAVDYPVDKVSCYISDDGASMCTFEALSETAEFARKWVPFCKKFSIEPRAPEMYFCDKIDYLKDKVHPTFVKERRAMKREYEEFKVRINALVAKAQKVPPGGWIMQDGTPWPGNNTKDHPGILQVFLGHNGGFDAEGNQLPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFILNLDCDHYVNNSKAVREAMCFLMDPQIGKKVCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYNPPKGPKRPKMVSCDCCPCFGRRKKLKYAKDDANGDDARLQGTDDDKELLMSQMNFEKKFGQSSIFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGTAPINLSDRLNQVLRWALGSIEIFFSHHCPAWYGYKGGNKLKWLERLSYVNTTIYPFTSIPLVAYCLLPAICLLTDKFIMPPISTFAGLYFIALFSSIMATGILELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKASDDEDFGELYTFKWTTLLIPPTTILVINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKLCGINC 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0286 1025 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 109 IPR013083 -
Bisa02g0286 1025 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 219 992 - -
Bisa02g0286 1025 SUPERFAMILY RING/U-box 21 109 - -
Bisa02g0286 1025 SUPERFAMILY Nucleotide-diphospho-sugar transferases 329 849 IPR029044 -
Bisa02g0286 1025 CDD mRING-HC-C4C4_CesA 35 85 - -
Bisa02g0286 1025 MobiDBLite consensus disorder prediction 135 155 - -
Bisa02g0286 1025 Coils Coil 414 434 - -
Bisa02g0286 1025 MobiDBLite consensus disorder prediction 178 198 - -
Bisa02g0286 1025 FunFam Cellulose synthase 19 110 - -
Bisa02g0286 1025 FunFam Cellulose synthase 433 607 - -
Bisa02g0286 1025 Pfam Cellulose synthase 316 1019 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bisa02g0286 1025 MobiDBLite consensus disorder prediction 174 212 - -
Bisa02g0286 1025 ProSiteProfiles Zinc finger RING-type profile. 37 83 IPR001841 -
Bisa02g0286 1025 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
Bisa02g0286 1025 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 456 607 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0286 Bisa-ChrBisa02 5073336 5080907 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0286 1 1025 Cell Wall Biosynthesis AT5G17420 84.772 0.0 1809