Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0280 ATGTTACTATTTCTTTGTTTGATCATTGTTCACTTTGGTGGGGTTTATGGTGGGGAAGAGAATGCCTATCAAATGAATGATAAAAGTTCTCTAAGAAATTTCATGTCAGGGATTGTTTCAGACCCAAGAAACTCCCTAGCAAGCTGGAGGTCTCCTGGTGTTCATGTTTGTGATTGGTCGGGAATAAGATGTAACAATGTAAGTGAAAGAGTCATAGAGATTGATCTTAGTGGGAGGTCTCTAGGAGGTACTATTTCCCCTGCTCTTGGTAACCTCTCTGCTTTGAAAATTCTTGATCTTTCTGGGAATTCTTTTGTGGGTCAGATTCCAAAAGAGTTGGGATATTTAGTTCAGCTTGGACAACTCAGTTTGTCTCGGAATCTTCTTCATGGAAAGATTCCCTCTGAGATGGGTTCACTTCACAACTTGTACTACCTTGACATGGGAAGTAATAGGCTTGAGGGTGGGATTCCACCTTCACTTTTCTGCAATTTGTCATCCTCATTGAGGTATATAGACCTCTCTAACAATACACTAGAGGGACAAATACCATTGAGTAATGAGTGCGTGCTTTATGAGCTTAGGTTCCTGTTACTTTGGTCAAACCACCTTGTGGGACAAGTTCCTTTAGCTCTGTCAAACTCCACACAACTCAAATGGCTCGATTTGGAGTCGAACATGTTGAGTGGAGAGTTACCATCTCAAATTGTATGTAATTGGCCTGAGTTACAGTACCTTTATTTATCCTATAATGGCTTTGTCACTCATGATGGCAACTCCAACCTTGAACCTTTCTTTGCTTCCTTTTTGAATTTGTCGAACTTCCAAGAACTTGAATTGGCTGGAAATAATCTTGGTGGGAAGCTACCTCATGTAATTGGAGATCTTCCCAAAACTTTACTAGAGCTTCACCTAGATGACAATCTCATATATGGTTCCATTCCCCCACACATTGCCAATCTTGTCAATCTGACTCTACTAAACTTGTCCAGTAACCACCTAAATGGATCAATCCCTCCCAGCCTATGTCAAATGGGTAGGCTTGAGAGAGTTTACTTGTCAAATAATTCGCTTTCTAGTGAGATTCCTTCGGCTTTCGGTCAAATTGAGCATCTGGGTCTTCTAGATTTGTCAAGAAACAAGCTTTCTGGTTCAATACCCGATAGTTTTGCCAATCTTTCCCAGTTAAGAAGGCTTTTACTTTATGACAACCAGCTTTTTGGGACAATACCACCAAGCCTGGGAAAATGTGTCAATTTGGAGATTTTAGACCTATCTCACAACAAGATTTCAGGGGTGATTCCCACAGAAGTTGCAGCCTTAACTAGCTTGAAAATATACTTGAATCTATCAAGGAATAACTTAGAGGGGCCTTTACCACTAGAGCTCAGCAAAATGGACATGGTGCTAGCTTTTGATCTATCCATGAACAATCTCTCTGGCAGAATCCCACCGCAGCTTGAAAGTTGCATTGCACTTGAGTATCTTAACCTTTCGGGTAATTCCTTGGAAGGCCCCCTTCCATATTCTTTAGGCCAGTTGCCTTATATTCGAGCACTTGATGTGTCTTTGAATCGATTGACAGGGGAAATACCTCAATCGCTGCAGTTATCTTCCACTCTCAAGGAACTTAATTTCTCTTTCAACAAATTCTCAGGGAATATATCAAGCAAGGGAGCATTTTCATATCTCACCATAGACTCGTTCCTAGGAAATGATGGCCTTTGTGGCTCAATAAAAGGCTTGCAAAGCTGCCATAAGAAACATAGCTATCGTTTGATTGTCTTAATAATTGTGGTCTTACTCTTTGGATCTCCCATGTTGTGTTTTGGGTTCAAGTTAGAATTCCATAAGAGACTAGCCATTGCGAGTAAAGGGGACTTGGAAGATTATGAAGAGGAAACAGAAGAGCTCCATTACCCAAGAATTTCCTATAAAAAACTTATTGAAGCCACTGGGGGTTTCAGTGCTTCAAGTTTAATAGGTTCGGGACAGTTTGGACAGGTCTACAAGGGTGTACTCCGAGATAATACAAGAATAGCAGTGAAAATATTAGGTACATCCGCAGCTACAGATATTTCAGGGAGCTTCAGAAGAGAATGCCAAATTCTGAAGAGAATTAGGCACAGAAACTTAATAAGGATCATCACAATTTGCAGCAAGCCTCAGTTCAAAGCTCTTGTTCTTCCACTGATGCCAAATGGTAGCCTCGAGAGGCACCTATATCCAAGCCATGGGTTGAGTCAGACGTTGGATTTGGTTCAGCTAGTAAGGATATGCAGTGATGTTGCTGAGGGAATGGCCTATCTACACCACTACTCACCAGTTAGAGTAGTGCATTGTGACCTTAAGCCAAGCAATATTCTTCTTGACGACGATATGACAGCTTTGGTAACAGATTTTGGAATTTCCAGGCTTGTTAAAGGTGACCAGGATATGTCCATCAATAACTCAGCATCTTTCAGTTCAACGCATGGCCTGTTACGTGGCTCCATTGGCTACATAGCCCCCGAGTATGGAATGGGAAAGCATGCCTCAACTCAAGGTGATGTCTACAGTTTCGGAGTACTCGTGTTAGAAATTGTGACAGGCAGGCCCCCCACAGATGTCCTTATCCATGAAGGTTCAAGCTTGCATGATTGGGTTAAGAGACAATATCCTCACAATATTGACAGCATTGTTAAACAAGCACTGGAAAGATGGTTGCCTTTAGGCCACCATCCACTGCAATATAACAAAATATGGCAAGATGTTATAATGGAACTCATAGAGCTGGGGCTTGTGTGCACACAGAACAATCCTTCAACAAGACCAAGCATGGTGGATGTAGCTCAAGAGATTGGGAGGTTGAAAGACTACCTTTCTAATCCATCTCCTTTAAATATTGAAGAAGTCAATCCCAAGGATGATTATTTCTGA 2919 0.4152 MLLFLCLIIVHFGGVYGGEENAYQMNDKSSLRNFMSGIVSDPRNSLASWRSPGVHVCDWSGIRCNNVSERVIEIDLSGRSLGGTISPALGNLSALKILDLSGNSFVGQIPKELGYLVQLGQLSLSRNLLHGKIPSEMGSLHNLYYLDMGSNRLEGGIPPSLFCNLSSSLRYIDLSNNTLEGQIPLSNECVLYELRFLLLWSNHLVGQVPLALSNSTQLKWLDLESNMLSGELPSQIVCNWPELQYLYLSYNGFVTHDGNSNLEPFFASFLNLSNFQELELAGNNLGGKLPHVIGDLPKTLLELHLDDNLIYGSIPPHIANLVNLTLLNLSSNHLNGSIPPSLCQMGRLERVYLSNNSLSSEIPSAFGQIEHLGLLDLSRNKLSGSIPDSFANLSQLRRLLLYDNQLFGTIPPSLGKCVNLEILDLSHNKISGVIPTEVAALTSLKIYLNLSRNNLEGPLPLELSKMDMVLAFDLSMNNLSGRIPPQLESCIALEYLNLSGNSLEGPLPYSLGQLPYIRALDVSLNRLTGEIPQSLQLSSTLKELNFSFNKFSGNISSKGAFSYLTIDSFLGNDGLCGSIKGLQSCHKKHSYRLIVLIIVVLLFGSPMLCFGFKLEFHKRLAIASKGDLEDYEEETEELHYPRISYKKLIEATGGFSASSLIGSGQFGQVYKGVLRDNTRIAVKILGTSAATDISGSFRRECQILKRIRHRNLIRIITICSKPQFKALVLPLMPNGSLERHLYPSHGLSQTLDLVQLVRICSDVAEGMAYLHHYSPVRVVHCDLKPSNILLDDDMTALVTDFGISRLVKGDQDMSINNSASFSSTHGLLRGSIGYIAPEYGMGKHASTQGDVYSFGVLVLEIVTGRPPTDVLIHEGSSLHDWVKRQYPHNIDSIVKQALERWLPLGHHPLQYNKIWQDVIMELIELGLVCTQNNPSTRPSMVDVAQEIGRLKDYLSNPSPLNIEEVNPKDDYF 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0280 972 CDD STKc_IRAK 661 950 - -
Bisa02g0280 972 Gene3D Phosphorylase Kinase; domain 1 627 730 - -
Bisa02g0280 972 Gene3D Transferase(Phosphotransferase) domain 1 732 960 - -
Bisa02g0280 972 ProSiteProfiles Protein kinase domain profile. 655 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0280 972 FunFam Leucine-rich repeat receptor-like protein kinase TDR 269 587 - -
Bisa02g0280 972 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 732 958 - -
Bisa02g0280 972 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Bisa02g0280 972 Gene3D Ribonuclease Inhibitor 189 258 IPR032675 -
Bisa02g0280 972 Gene3D Ribonuclease Inhibitor 24 188 IPR032675 -
Bisa02g0280 972 SMART LRR_sd22_2 140 167 - -
Bisa02g0280 972 SMART LRR_sd22_2 259 280 - -
Bisa02g0280 972 SMART LRR_sd22_2 417 438 - -
Bisa02g0280 972 SUPERFAMILY L domain-like 27 256 - -
Bisa02g0280 972 SUPERFAMILY Protein kinase-like (PK-like) 633 945 IPR011009 -
Bisa02g0280 972 Gene3D Ribonuclease Inhibitor 467 578 IPR032675 -
Bisa02g0280 972 SUPERFAMILY L domain-like 265 358 - -
Bisa02g0280 972 ProSiteProfiles Leucine-rich repeat profile. 419 440 IPR001611 GO:0005515
Bisa02g0280 972 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 189 - -
Bisa02g0280 972 ProSitePatterns Serine/Threonine protein kinases active-site signature. 778 790 IPR008271 GO:0004672|GO:0006468
Bisa02g0280 972 SMART serkin_6 655 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0280 972 SMART LRR_typ_2 345 368 IPR003591 -
Bisa02g0280 972 SMART LRR_typ_2 272 296 IPR003591 -
Bisa02g0280 972 SMART LRR_typ_2 92 116 IPR003591 -
Bisa02g0280 972 SMART LRR_typ_2 393 417 IPR003591 -
Bisa02g0280 972 SMART LRR_typ_2 418 441 IPR003591 -
Bisa02g0280 972 SMART LRR_typ_2 140 164 IPR003591 -
Bisa02g0280 972 SMART LRR_typ_2 369 392 IPR003591 -
Bisa02g0280 972 SMART LRR_typ_2 321 344 IPR003591 -
Bisa02g0280 972 Pfam Leucine Rich repeat 417 432 IPR001611 GO:0005515
Bisa02g0280 972 Gene3D Ribonuclease Inhibitor 259 361 IPR032675 -
Bisa02g0280 972 Gene3D Ribonuclease Inhibitor 362 466 IPR032675 -
Bisa02g0280 972 SUPERFAMILY L domain-like 327 577 - -
Bisa02g0280 972 Pfam Leucine rich repeat 347 406 IPR001611 GO:0005515
Bisa02g0280 972 Pfam Protein kinase domain 657 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0280 972 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 372 947 - -
Bisa02g0280 972 Pfam Leucine Rich Repeat 493 512 IPR001611 GO:0005515
Bisa02g0280 972 ProSitePatterns Protein kinases ATP-binding region signature. 661 683 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0280 Bisa-ChrBisa02 4988502 4991738 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0280 27 952 Receptor kinase-like Gene Family AT3G47570 35.059 9.27e-156 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bisa02g0280 Pkinase 6.6e-44 CL0016