Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0276 ATGGGTAATCCTGGATCATTTCGTTTTGTGCCTCAAATCTTTCTTCTTATTGGTGTTGCCTTTGCGACATCTTTGTCGGACTCATTTGTCCAACAACAACGGGACAGGATTCGGAAGCTGCCGGGTCAGAACTTTAACATCGAATTCGCGCACTATGCTGGGTATGTCACGGTCGACCAGGAGGCTGGGAGGGCACTGTTTTACTGGTTCATTGAGGCAGCTCAAGACCCTGAATCCAAACCTCTTGTTCTTTGGCTCAACGGAGGACCTGGATGTTCATCCATTGCTTATGGGGAGGCAGAGGAAATTGGCCCCTTTCACATTCAGCCAGATGGCAAGACCCTTTATCTAAATCCTTATTCTTGGAATCAAGTTGCCAACGTTCTTTTTCTTGATTCTCCTGTTGGAGTTGGATTTTCGTATTCAAACACTTCATCTGACGTACTAGAGAATGGCGACAAGAGGACTGCTAAGGACTCTTTGAAATTCCTCTTGAATTGGTTTGAGCGTTTTCCCCAGTATAAAGGAAGAGACTTTTTAATTGCTGGTGAGAGCTATGCAGGGCATTATGTTCCTCAACTTACCCAAGCTATTGTTGAGTACAACAGGAAAACCAAAGAAGATATAAATCTGAAAGGCTACATGGTAGGAAATGCTCTGACTGATGATTACCACGATCACTTGGGGATTGCCCAGTTTATGTGGTCATCCGGTTTGATTTCTGATCAAACATACCAGCAAATGAAAATTAAATGTAATTTTGAGTCTTTCCTAAATCCCTCAGACTCATGCGAAAAAATTTTAGACATTGCTGATAACGAAATTGGCGACATTGATCCGTACAGTATTTTTACTCCTACATGCACTGTTAATATTAGCCAGACAAACCAGCTGGTGAAAAGAAAGCATAGAATTGGCAGTCTCAAAAGGGCATATGATCCTTGCACCGAGAAGCACTCCACTGTGTACTTTAATCTACCTGAAGTCCAAGAGGCTCTTCATGTTGATCCAGCTCATGCACCATATAAATGGGAGACCTGCAGTGATGTGGTAAGTATGAACTGGAAGGATTCTCCAATGACAGTGCTTGATATTTATCGTGAACTTATTCCGTTAGGACTGCGGATATGGATGTTCAGTGGTGACACAGATGCTGTAATCCCAGTAACATCCACTCGCTACACTATAGATGCTCTGAATCTTACGACTGTGAGCCCTTGGCGTCCCTGGTATGATGATGGGCAGGTGGGAGGATGGACCCAGGAATACGAGGGACTCACTTTTGTAGCAGTAAGGGGAGCAGGGCATGAGGTTCCTCTGCACAGACCAAAACTTGCTCTTGCACTCATAAAAGCCTTCCTTGCTGGATCTTCCATGCCCTCCCTTGAGCCTCAGAAGCTAGTTAGTGCCTACTGA 1416 0.4442 MGNPGSFRFVPQIFLLIGVAFATSLSDSFVQQQRDRIRKLPGQNFNIEFAHYAGYVTVDQEAGRALFYWFIEAAQDPESKPLVLWLNGGPGCSSIAYGEAEEIGPFHIQPDGKTLYLNPYSWNQVANVLFLDSPVGVGFSYSNTSSDVLENGDKRTAKDSLKFLLNWFERFPQYKGRDFLIAGESYAGHYVPQLTQAIVEYNRKTKEDINLKGYMVGNALTDDYHDHLGIAQFMWSSGLISDQTYQQMKIKCNFESFLNPSDSCEKILDIADNEIGDIDPYSIFTPTCTVNISQTNQLVKRKHRIGSLKRAYDPCTEKHSTVYFNLPEVQEALHVDPAHAPYKWETCSDVVSMNWKDSPMTVLDIYRELIPLGLRIWMFSGDTDAVIPVTSTRYTIDALNLTTVSPWRPWYDDGQVGGWTQEYEGLTFVAVRGAGHEVPLHRPKLALALIKAFLAGSSMPSLEPQKLVSAY 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0276 471 FunFam Carboxypeptidase 312 459 - -
Bisa02g0276 471 Gene3D - 315 352 - -
Bisa02g0276 471 ProSitePatterns Serine carboxypeptidases, histidine active site. 426 443 IPR033124 GO:0004185
Bisa02g0276 471 FunFam Carboxypeptidase 362 456 - -
Bisa02g0276 471 Gene3D - 362 456 - -
Bisa02g0276 471 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 37 443 IPR001563 GO:0004185|GO:0006508
Bisa02g0276 471 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Bisa02g0276 471 Gene3D alpha/beta hydrolase 31 290 IPR029058 -
Bisa02g0276 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Bisa02g0276 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Bisa02g0276 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Bisa02g0276 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 426 439 IPR001563 GO:0004185|GO:0006508
Bisa02g0276 471 Pfam Serine carboxypeptidase 41 455 IPR001563 GO:0004185|GO:0006508
Bisa02g0276 471 FunFam Carboxypeptidase 32 290 - -
Bisa02g0276 471 SUPERFAMILY alpha/beta-Hydrolases 37 458 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0276 Bisa-ChrBisa02 4936071 4939996 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0276 325 459 Calmodulin-binding Proteins AT2G22960 25.000 1.66e-10 58.5