Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0268 ATGGCGAAGTTATCAGAGCAAACCCAGAAAAGCAATAACAATCCTAGGAGGAAGAACAACAACCTCAAGGCAACTAACAACAGTACGAGTACGAATGGTGTGGCTGTGCCGACCACCACGAAGACGAAACGAACAAGGAGAAGTGTCCCTAGAGATTCCCCGCCCCAACGTAGCTCCATATATAGAGGAGTCACTAGGCACCGATGGACAGGAAGATACGAAGCTCACTTGTGGGACAAGAATTGCTGGAATGAGTCGCAGAACAAGAAAGGCCGACAAGGTGCCTATGACGATGAAGAGACTGCAGCACATGCTTATGATCTAGCAGCATTGAAATACTGGGGTCAAGACACCATTCTTAACTTTCCGTTATCGACCTACCTCATAGAGATGAAAGAAATGGAGGGTCAATCAAGAGAGGAGTATATTGGATCATTAAGGAGGAAAAGCAGTGGTTTTTCTAGGGGAGTTTCTAAATACAGAGGTGTTGCAAGACATCATCACAATGGAAGATGGGAAGCTCGCATTGGCAGAGTTTTCGGCAACAAATATCTTTATCTTGGGACTTATGGTACCCAAGAAGAAGCTGCCACGGCATATGATTTGGCGGCAATTGAATATCGTGGACTCAACGCCGTCACTAATTTTGACTTAAGCCGTTATATTAAGTGGCTTAAGCCTAGGAGTAACGATAACGACGTGATTAACACTGATGTTCTTAGCGAGTCTAATAATAACCTTACATGCGACACCAACGTCACCCAACCAAACCCTAACTATCAAGAACAAGGATTCAATTCTTTCAACAATCATGATTTTTTATTAATTAGTAGAGAAGAAAATACATTGATTCAGTCACGACCAACAGTGACTGCCACGTCAGCCCTAGGGCTCCTCCTTCAGTCTTCCAAGTTTAAGGAAATGATGGAGATGACATCCGCCGCTGATTTGTCGGTGGCGCCATCGCTGCCAGAGGAGTCTAGGTCGCCGCCGTGCTCGTTTCCCGATGATATTCAGACATTCTTTGAGTGCGAAGATTCCAACGAATATGGAGGTCATGGGGATCATGGTACCATGTTCAATGAGCTCAGTTCCTTTGTTCCCCCTATGTTCCACTATGATGATTTTGAGACTTAA 1137 0.4477 MAKLSEQTQKSNNNPRRKNNNLKATNNSTSTNGVAVPTTTKTKRTRRSVPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQGAYDDEETAAHAYDLAALKYWGQDTILNFPLSTYLIEMKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYGTQEEAATAYDLAAIEYRGLNAVTNFDLSRYIKWLKPRSNDNDVINTDVLSESNNNLTCDTNVTQPNPNYQEQGFNSFNNHDFLLISREENTLIQSRPTVTATSALGLLLQSSKFKEMMEMTSAADLSVAPSLPEESRSPPCSFPDDIQTFFECEDSNEYGGHGDHGTMFNELSSFVPPMFHYDDFET 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0268 378 CDD AP2 59 125 IPR001471 GO:0003700|GO:0006355
Bisa02g0268 378 SUPERFAMILY DNA-binding domain 158 219 IPR016177 GO:0003677
Bisa02g0268 378 ProSiteProfiles AP2/ERF domain profile. 159 217 IPR001471 GO:0003700|GO:0006355
Bisa02g0268 378 FunFam AP2-like ethylene-responsive transcription factor 59 125 - -
Bisa02g0268 378 Gene3D AP2/ERF domain 158 219 IPR036955 GO:0003700|GO:0006355
Bisa02g0268 378 Gene3D AP2/ERF domain 60 125 IPR036955 GO:0003700|GO:0006355
Bisa02g0268 378 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 21 245 - -
Bisa02g0268 378 MobiDBLite consensus disorder prediction 1 63 - -
Bisa02g0268 378 CDD AP2 158 219 IPR001471 GO:0003700|GO:0006355
Bisa02g0268 378 FunFam AP2-like ethylene-responsive transcription factor 158 219 - -
Bisa02g0268 378 MobiDBLite consensus disorder prediction 1 43 - -
Bisa02g0268 378 SUPERFAMILY DNA-binding domain 59 125 IPR016177 GO:0003677
Bisa02g0268 378 SMART rav1_2 60 129 IPR001471 GO:0003700|GO:0006355
Bisa02g0268 378 SMART rav1_2 159 223 IPR001471 GO:0003700|GO:0006355
Bisa02g0268 378 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Bisa02g0268 378 PRINTS Ethylene responsive element binding protein signature 199 219 IPR001471 GO:0003700|GO:0006355
Bisa02g0268 378 ProSiteProfiles AP2/ERF domain profile. 60 123 IPR001471 GO:0003700|GO:0006355
Bisa02g0268 378 Pfam AP2 domain 158 209 IPR001471 GO:0003700|GO:0006355
Bisa02g0268 378 Pfam AP2 domain 60 115 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0268 Bisa-ChrBisa02 4784118 4786351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0268 56 258 AP2-EREBP Transcription Factor Family AT5G57390 61.650 5.32e-84 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bisa02g0268 AP2 4.2e-09 CL0081