Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0266 ATGCCAGATTTAGGAAATTTATCGCTCTCAGCAGCTCTGGAGCTGCCTCACTGCCCTAATTTAAATTCCTCTACCGAGCCATCTGATCTGACCAGTTCTTTGTACTCAGTCCCAGTCAAAACACCAGGCAATGGTTACATTTCTGACCACTCTTTGCTATTCCCCGTTCTTCGGCAAGAGGAGGCCCACAATGGAAATGGATTTAGGGTTTCGAAGCGGAGCCGTGGTTCTTTGGACCGAGTCAAGAAGGCAGCCAATGACAAGGGTTTAGAGGACCACGTGAAAGACTGGGCTGAGAAGAAGATGGATTTAGGGTTTAATAGATTGGATTGCACGCTTCCATTCCTTGTCGGTGCTCCAAAGTTGGCTGAATGCCCTTTTTGTCATCATTTTGTCAACCCGGGGATGGAGTTTTTATGTTCTGTTCGTGGCTGTGAAAGAGTCTACCATGTCGAATGCGCAAAAGAAGCTGTTGGGGTCTCAAATCTCAAAAAATTCAAGTGCCCACAACATGTATGCTTTATCTGCAAACAAAAATTACAGTGGCGGTGTGAGCGGTGCACTATGGCATTTCATATTAAATGTGCACCATGGCCGGATGCTGTTATGCCTTTAAAGGATCATCCCGGAGGAGCTATTTGTTGGAGGCATCCTTCCGAGTGGCGGTTGGATAGGAAGGAAGTGTTTTGCCGTTTGCCTCTTCCCTATGACAATGAGGAGTTCAAGATTGATTTCACATGGAAAGACATGGAAAGCAAGACGGAGCCGCCTCCATATATACACATAAGACGCAATGTATACCTAGTGAAGAAGAAGCGCAGTGATGCAGATGATGGTGCAGGGTGCACCAGTTGTAGTTCTACTTCTACATGCTCTGATGATTGTGTGTGCAGAGTTCAATGCATAAGCTGCTCTAAGGCTTGTCGCTGCTCAGAAAATTGCAGTAATAGGCCATTTCGCAAAGAGAAAAAGATCAAGATTGTCAAGACTGAGCTTTGTGGTTGGGGAGTAGAGGCTGCGGAAACCATCAATAAAGGCGAATTTATAATTGAGTATATTGGAGAAGTAATAGATGATGCTTTGTGTGAAAAAAGGCTTTGGGACATGAAATACAGAGGTGAACAGAATTTTTATATGTGTGAACTTCGGAAAGACTTCACCATAGATGCAACTTTCAAAGGAAATACATCACGCTTTTTAAACCATAGCTGTGATCCCAACTGTGTTTTGGAAAAGTGGCAATTTGATGGTGAAACTCGCGTGGGTGTCTTCGCTGCCCGTCCAATAGAAGTTGGAGAACCATTAACATATGATTACAGATTTGTGCAATTTGGACCAGAGGTAAAATGCCACTGTGGCGCTCCAAATTGTCAAGGCTTTCTAGGAACCAAAAAGAAGATTGACAAGGTTAACCTTTGTTGGGGCTCAAAACGGAAGAGAACTTCGGCTTCTTGCATTCAAATAGTAACACCCGTATGA 1479 0.4408 MPDLGNLSLSAALELPHCPNLNSSTEPSDLTSSLYSVPVKTPGNGYISDHSLLFPVLRQEEAHNGNGFRVSKRSRGSLDRVKKAANDKGLEDHVKDWAEKKMDLGFNRLDCTLPFLVGAPKLAECPFCHHFVNPGMEFLCSVRGCERVYHVECAKEAVGVSNLKKFKCPQHVCFICKQKLQWRCERCTMAFHIKCAPWPDAVMPLKDHPGGAICWRHPSEWRLDRKEVFCRLPLPYDNEEFKIDFTWKDMESKTEPPPYIHIRRNVYLVKKKRSDADDGAGCTSCSSTSTCSDDCVCRVQCISCSKACRCSENCSNRPFRKEKKIKIVKTELCGWGVEAAETINKGEFIIEYIGEVIDDALCEKRLWDMKYRGEQNFYMCELRKDFTIDATFKGNTSRFLNHSCDPNCVLEKWQFDGETRVGVFAARPIEVGEPLTYDYRFVQFGPEVKCHCGAPNCQGFLGTKKKIDKVNLCWGSKRKRTSASCIQIVTPV 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0266 492 ProSiteProfiles Post-SET domain profile. 446 462 IPR003616 -
Bisa02g0266 492 PANTHER SET DOMAIN PROTEINS 83 480 - -
Bisa02g0266 492 Pfam SET domain 334 439 IPR001214 GO:0005515
Bisa02g0266 492 SMART PHD_3 124 172 IPR001965 -
Bisa02g0266 492 SMART PHD_3 173 218 IPR001965 -
Bisa02g0266 492 FunFam Histone-lysine N-methyltransferase 236 473 - -
Bisa02g0266 492 SMART set_7 323 446 IPR001214 GO:0005515
Bisa02g0266 492 CDD SET_ASHR3-like 324 462 - -
Bisa02g0266 492 ProSiteProfiles SET domain profile. 323 440 IPR001214 GO:0005515
Bisa02g0266 492 ProSiteProfiles AWS domain profile. 277 323 IPR006560 GO:0005634|GO:0042054
Bisa02g0266 492 SMART PostSET_3 446 462 IPR003616 -
Bisa02g0266 492 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 220 IPR013083 -
Bisa02g0266 492 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 491 IPR025787 -
Bisa02g0266 492 Gene3D SET domain 236 481 IPR046341 -
Bisa02g0266 492 SUPERFAMILY SET domain 248 459 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0266 Bisa-ChrBisa02 4770131 4775572 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0266 304 461 C2H2 Transcription Factor Family AT2G23740 35.754 6.27e-24 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bisa02g0266 SET 3.6e-19 No_clan