Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0262 ATGATGAGAACGCTGAATTGTTCTCCCATTACATCCAGGGATTCCCCCATTTCTATTGTGCTATCAAATGCAACATATGATCATAACCATTGTTCCATAATCATGGCTCTCTGTTGGATTTTTCTTCTCTTCTTCTTCTTCTTTATCTCCTATGCTCCACTCTGTTTCTCCTATGAGCCTCGCAACCATGAAGTGGAGGCTTTGATGAGCATAAGAGCATCTCTGAATGATCCTCATGGGGTATTAAGCAACTGGGATGAATACTCCGTAGACCCTTGTAGTTGGGCCATGATCACTTGCTCATCTGAGTCCCTTGTTATAGGACTGGGAGCGCCAAGCCAGTCCCTCTCTGGAACTTTATCAGGAGCTATAGGAAATCTGACAAATCTTCGACAAGTATTACTGCAGAACAACAATGTATCTGGCAAAATCCCACCGGAACTGGGTACCCTTTCAAACCTACAGACTTTAGATCTTTCTAATAATCGATTCTCTGGTGTGATTCCAGGCTCTTTAAGTCACTTGGATAGTCTCCAGTACCTGAGGCTGAACAATAATAGTCTGTCTGGGCCCTTTCCTGTGTCGCTTGCAAAAGTCCCTCAGCTTGCTTTCTTGGACTTGTCTTATAACAATCTCAGTGGACCATTGCCCAAGTTTCCAGCTAGATCTTTCAATGTGGTGGGAAACCCATTGATTTGTGGAAGCAGTTCTACAGAAGGTTGCTCTGGACCGGCAAACCTCATGCCAGTTTCCTTCTCTTTGGCATCATCACAAGGAAAACACAAGTCCAAGAAAATAGCAATTGCACTTGGGATCAGCCTTAGCTGTGCTTGTCTCATACTCCTGTCTTTTGGGCTCCTATTGTATCGAAAGAAAGGACAGCACAAGGCTCTTTTGTTTATCAGTGATTATCAGGAAGACGGGCTTGTTAGCTTGGGAAATCTGAATATCTTCACTTTCAGAGAGCTCCAACATGCAACAGATAATTTCAGCTCCAAGAATTTACTTGGTGCTGGAGGTTTTGGCAACGTGTATAGGGGAAAGCTTGGAGATGGGACAATGGTGGCGGTGAAGAGGCTTAAGGATGTGACTGGAAGTGCTGGAGAATCGCAGTTCCGAACAGAATTGGAGATGATCAGCTTGGCAGTTCACCGGAACTTGCTTCGCTTGATTGGATATTGTGCTACTCCTAATGAGAAGCTTCTGGTTTATCCTTATATGTCCAATGGAAGTGTGGCTTCCAGGCTTAGAGGCAAACCTGCTTTAGATTGGAACACAAGAAAGAGGATAGCAATTGGAGCTGCCAGAGGCCTTCTGTACCTACATGAGCAGTGTGATCCAAAGATAATACACAGAGATGTTAAGGCTGCTAATGTGCTTCTGGATGAGTATTTCGAAGCTGTTGTTGGTGATTTTGGCCTTGCAAAGCTCCTCGACCATGCTGACTCTCATGTCACCACTGCGGTCCGTGGCACTGTAGGTCACATTGCACCAGAGTACCTCTCCACAGGCCAATCATCTGAGAAAACTGATGTGTTTGGATTTGGCATTCTCTTGTTGGAGCTCATAACAGGAATGACAGCTCTTGAGTTTGGGAAAACAGTGAATCAGAAAGGTGCAATGCTTGAGTGGGTTAAGAAAATACAGCAGGAAAAGAAGGTTGAAGTGTTGGTGGACAAGGAGTTAGGGAGTAACTATGACAGGATAGATGTGGGGGAGATGCTACAAGTGGCTTTACTTTGCACTCAATATCTCCCCGCCCACCGCCCCAAAATGTCAGAAGTGGTCAGAATGCTCGAAGGCGATGGTCTTGCCGAGAAGTGGGCAGCTTCACACAATCATGGTAGTCTCACCGTGAGCAACAACTTCCACAGCAACAGAAGCAATAATTCGTCTTCTTTCCGCCCTACCCCTGCTTCAAAGGATGACAACAATGCTCATGATCGTTCCAGCATGTTTGGCATGGGATTGGATGGTGATGATGATGATGAACATTCCTTGGATTCCTATGCCATGGAGCTTTCTGGTCCTAGATAA 2037 0.4531 MMRTLNCSPITSRDSPISIVLSNATYDHNHCSIIMALCWIFLLFFFFFISYAPLCFSYEPRNHEVEALMSIRASLNDPHGVLSNWDEYSVDPCSWAMITCSSESLVIGLGAPSQSLSGTLSGAIGNLTNLRQVLLQNNNVSGKIPPELGTLSNLQTLDLSNNRFSGVIPGSLSHLDSLQYLRLNNNSLSGPFPVSLAKVPQLAFLDLSYNNLSGPLPKFPARSFNVVGNPLICGSSSTEGCSGPANLMPVSFSLASSQGKHKSKKIAIALGISLSCACLILLSFGLLLYRKKGQHKALLFISDYQEDGLVSLGNLNIFTFRELQHATDNFSSKNLLGAGGFGNVYRGKLGDGTMVAVKRLKDVTGSAGESQFRTELEMISLAVHRNLLRLIGYCATPNEKLLVYPYMSNGSVASRLRGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDEYFEAVVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTALEFGKTVNQKGAMLEWVKKIQQEKKVEVLVDKELGSNYDRIDVGEMLQVALLCTQYLPAHRPKMSEVVRMLEGDGLAEKWAASHNHGSLTVSNNFHSNRSNNSSSFRPTPASKDDNNAHDRSSMFGMGLDGDDDDEHSLDSYAMELSGPR 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0262 678 Gene3D Phosphorylase Kinase; domain 1 300 406 - -
Bisa02g0262 678 FunFam Somatic embryogenesis receptor kinase 1 299 406 - -
Bisa02g0262 678 MobiDBLite consensus disorder prediction 619 678 - -
Bisa02g0262 678 SMART serkin_6 330 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0262 678 MobiDBLite consensus disorder prediction 641 660 - -
Bisa02g0262 678 Gene3D Ribonuclease Inhibitor 61 243 IPR032675 -
Bisa02g0262 678 Pfam Protein tyrosine and serine/threonine kinase 333 599 IPR001245 GO:0004672|GO:0006468
Bisa02g0262 678 SUPERFAMILY Protein kinase-like (PK-like) 312 600 IPR011009 -
Bisa02g0262 678 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Bisa02g0262 678 PRINTS Leucine-rich repeat signature 154 167 - -
Bisa02g0262 678 PRINTS Leucine-rich repeat signature 199 212 - -
Bisa02g0262 678 SUPERFAMILY L domain-like 62 226 - -
Bisa02g0262 678 SMART LRR_typ_2 151 174 IPR003591 -
Bisa02g0262 678 SMART LRR_typ_2 175 206 IPR003591 -
Bisa02g0262 678 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 40 610 - -
Bisa02g0262 678 Pfam Leucine rich repeat 152 212 IPR001611 GO:0005515
Bisa02g0262 678 Gene3D Transferase(Phosphotransferase) domain 1 407 618 - -
Bisa02g0262 678 FunFam Somatic embryogenesis receptor-like kinase 1 407 619 - -
Bisa02g0262 678 ProSiteProfiles Protein kinase domain profile. 330 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0262 678 MobiDBLite consensus disorder prediction 619 640 - -
Bisa02g0262 678 FunFam Putative LRR receptor-like serine/threonine-protein kinase 61 243 - -
Bisa02g0262 678 Pfam Leucine rich repeat N-terminal domain 62 101 IPR013210 -
Bisa02g0262 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Bisa02g0262 678 ProSiteProfiles Leucine-rich repeat profile. 153 175 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0262 Bisa-ChrBisa02 4713796 4720113 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0262 32 678 Receptor kinase-like Gene Family AT5G16000 63.389 0.0 795
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Bisa02g0262 PK_Tyr_Ser-Thr 1e-41 CL0016