Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0237 ATGGGCAGAAGCAATAGCAGAGGCTTTAGCTTTCTAGAAGATAAAGGAGAAGCCTTTGTGCCTCCCTCACAACACCCACCGCCATTATACTCACTCTCTCTATCGAGCCCACATTCCCTTCCCAATGTTCCGTCTCAAAATTTCAGTTTAAACGACAAGATCAATCCAAGCGTCCTCCTCATCATTATAATCCTCGCCATCGTCTTCTTCGTCTCCGGTCTCCTCCACCTGCTCGTCCGATTCCTCTGGAGACCACAAGCCAGAGACCCCGACGACCTAGAAAACGTCACAGCCCTTCAGGGCCAACTGCAACAGCTCTTCCACCTCCACGACTCCGGGGTCGACCAGTCCTTCATCGACACCCTCCCCGTGTTCCACTACAAGGCCATCATCGGACCCAAGAATCCCTTCGATTGCGCCATTTGCTTGTGCGAGTTCGAAGCAGAGGACAAGCTCAGGTTGCTGCCCAGATGCAGCCACGCCTTTCACATGGAGTGCATCGACACGTGGCTCTTGTCCCACTCCACTTGCCCTCTTTGTCGAGCCAGCTTGCTCTGCGATCTCTCCTCCGCCAACACTCGTTCCCCCATTGTCCTCGTTCTCGAATCCGGGAGTGACAGCTCCAGAGAGATTGTCCCAGAAAGGGATCCCAATTCCAACACTGTCGGGGAAGCCGAGTCCGGGTCGACCCGGTTCGATTCGGAGAACAAATCGGGTGGAGTGGTGACTGTGAAGCTGGGGAAGTTCAGGAATGTGGATAATAATGGTGAAGGTAGTAGTAGTAGTAGTAATGACGATAATACCGAGAGTACTAATGTGGATGCAAGAAGGTGTTTCTCTATGGGGTCGTTTGCTTATGTGATGGACGAGAATTCTTCGCTCCAGGTTCCAATTAGAGCGCAAATCAAGAACAAGAAGAAGCATAATTTGCCTTTAACCCCGGGGCACAGGGCTGCAATGTCGGAATGCGACTGTGAATCCAGAAGGGATTTCAGATTCTCCTGTTTGGACGGAAATAGAGGGGAAAATGTTTCTGGGGTTTCGAGCTCTGGGGTTATCGGCAGAAAAGAGAGTCTGTCGGTGTCCAAGATTTGGCTTCGAGGGAAGAAGGAGAAGCCCAGTGGGCTTGCGGATTCGTCGAGGAGGGCGGTGTCGTTTCGGCTTCCGCCGCAGGGGCACGAGAATTTGAAGGGGACGAATGGGAAATCGGAGACGAGAAGTACGATCTCTGAGATGGATATCGAGAAATGGGAAAATGGAGGAAGTGAATTCGGGTATGACGATGAAAACCAGAGCTGTTACAGTGTGGATTCGCAGGCGAGAGCGCCTTCATTTGCTCGAAGGACTCTGCTTTGGCTTACGGGAAGACAGAATAAGGTTGTTCACTCGTCCTCTGATTCCAACAATTTATAA 1413 0.5145 MGRSNSRGFSFLEDKGEAFVPPSQHPPPLYSLSLSSPHSLPNVPSQNFSLNDKINPSVLLIIIILAIVFFVSGLLHLLVRFLWRPQARDPDDLENVTALQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAIIGPKNPFDCAICLCEFEAEDKLRLLPRCSHAFHMECIDTWLLSHSTCPLCRASLLCDLSSANTRSPIVLVLESGSDSSREIVPERDPNSNTVGEAESGSTRFDSENKSGGVVTVKLGKFRNVDNNGEGSSSSSNDDNTESTNVDARRCFSMGSFAYVMDENSSLQVPIRAQIKNKKKHNLPLTPGHRAAMSECDCESRRDFRFSCLDGNRGENVSGVSSSGVIGRKESLSVSKIWLRGKKEKPSGLADSSRRAVSFRLPPQGHENLKGTNGKSETRSTISEMDIEKWENGGSEFGYDDENQSCYSVDSQARAPSFARRTLLWLTGRQNKVVHSSSDSNNL 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0237 470 CDD RING-H2_EL5-like 138 181 - -
Bisa02g0237 470 SMART ring_2 139 180 IPR001841 -
Bisa02g0237 470 Pfam Ring finger domain 138 181 IPR001841 -
Bisa02g0237 470 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 51 365 - -
Bisa02g0237 470 FunFam RING-H2 finger protein ATL46 101 186 - -
Bisa02g0237 470 SUPERFAMILY RING/U-box 118 191 - -
Bisa02g0237 470 MobiDBLite consensus disorder prediction 208 237 - -
Bisa02g0237 470 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 187 IPR013083 -
Bisa02g0237 470 MobiDBLite consensus disorder prediction 250 272 - -
Bisa02g0237 470 MobiDBLite consensus disorder prediction 253 272 - -
Bisa02g0237 470 MobiDBLite consensus disorder prediction 220 237 - -
Bisa02g0237 470 ProSiteProfiles Zinc finger RING-type profile. 139 181 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0237 Bisa-ChrBisa02 4327303 4328715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0237 50 465 C3H Transcription Factor Family AT2G18650 47.973 4.80e-106 320