Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa02g0236 | ATGCCTCCAATTCCCCACCATGACCAAACCCATCCCAAGCCAAGCCCCAAGCTCCTTTCCCTCCTCCTTAAGGCCATCATCATGACCCTTCTCACCTCCCTTTTCTTCCTCTTCCTCGGTTTCGCCGCCTTCGTCCTCCTCCACCTCTGCGTCGTCGGTGGCCTCCTCCACCGCCTTCGCTCCCGCCCCACCGCCCAAGTCGGACCTTCCTCCAACGGGATCGCGTCTCGTGACGTCAAGAAGCTTCCCCACTTCCGGGTCGCCAGCGGCACCGAACCCGGACCCGAAACCCAATGCGTCGTTTGCTTGGATGGCTTCCGGAACGGCCACTGGTGCAGGAAGCTCGACGGATGTGGCCACGTGTTCCACCGGAGATGTGTGGACATGTGGCTTGTCAAGATGGCTGCGTGTCCTACATGCAGGACACCTGTCCGATTAAATGCTGGCGATGTAGGTTTTGATATTCAAAGAGAGGAAGCGAAGCAATTTTGGACCTGCGGTAGGAGCGGTGCCCAAATTTGA | 522 | 0.5843 | MPPIPHHDQTHPKPSPKLLSLLLKAIIMTLLTSLFFLFLGFAAFVLLHLCVVGGLLHRLRSRPTAQVGPSSNGIASRDVKKLPHFRVASGTEPGPETQCVVCLDGFRNGHWCRKLDGCGHVFHRRCVDMWLVKMAACPTCRTPVRLNAGDVGFDIQREEAKQFWTCGRSGAQI | 173 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa02g0236 | 173 | Pfam | Ring finger domain | 98 | 141 | IPR001841 | - | |
| Bisa02g0236 | 173 | SMART | ring_2 | 99 | 140 | IPR001841 | - | |
| Bisa02g0236 | 173 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 74 | 149 | IPR013083 | - | |
| Bisa02g0236 | 173 | ProSiteProfiles | Zinc finger RING-type profile. | 99 | 141 | IPR001841 | - | |
| Bisa02g0236 | 173 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE ATL42 | 8 | 151 | - | - | |
| Bisa02g0236 | 173 | SUPERFAMILY | RING/U-box | 94 | 147 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa02g0236 | 13 | 150 | C3H Transcription Factor Family | AT2G18670 | 46.763 | 1.35e-32 | 113 |