Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa02g0235 | ATGCTCTCGAGATCTTGCTTAGACTTATTGAATTTAGTCTCCATCGATGACTACCAAACACTGAGTCGGATCCCCAAGGTCATGACGGTCCCGGGAGCTATACCCGAATTCCAAGCCCACGACGATGCCTCTTCCGGGTCGGGTACGGAGGCCGCCGTTTGTTCTGTTCCCCAAGAACGCAGAATCATCGTCGCCAACCAGTTACCAATAAGGTCCCGTCGCGATGCGGAGACCAAGAAATGGAGTTTCGAATTGGATACTGATAGTCTTGCACTGCAGCTCAAAGACGGGTTCCCCTCCGACGTCGAAGTTCTCTATGTGGGTTCTTTGGGAGCCGATATCGATTCATCGGAACAAGACGAAGTGTCCCAAATCTTGCTCGACAAGTTCCGATGTGTTCCTACGTTTTTGCCCCATGAGATTCAGAACAAGTTCTACCACGGATTCTGCAAGCATTACCTGTGGCCTCTGTTTCACTACATGTTGCCCATGTCGCCGAGTCACGGCGCGCGCTTCGACCGCGCGCAGTGGCAAGCTTACGTTTTGGCGAACAAGATTTTCGCCGATAAGGTAACGGAGGTGATAAACCCAGACGAGGATTACGTTTGGGTCCACGATTATCATCTCATGATTTTGCCTACCTTATTGAGGAAACGGTTCCATCGGGTCAAACTCGGGTTTTTCCTGCACAGTCCATTCCCATCCTCAGAAATCTACAGAACTATTCCTGTTCGCGATGATATCCTCCGGGCGATGTTAAATTGCGATTTACTCGGATTCCACACGTTTGATTACGCGAGACATTTCTTGTCCTGTTGCAGCAGGATGCTGGGGTTGGATTACGAGTCCAAGAGGGGTTACATTGGACTAGATTATTACGGCCGAACCGTGACGATTAAGATCCAACCCGTTGGGATTCACATGGGTCAGCTCGAATCGGTGTTGTCGTTACCCCAGACTGGTGAGAGGATTAAAGAATTGAAGAAACAATATGAGGGGAAGATTGTGATATTGGGGGTGGACGATATGGATTTGTTCAAAGGTATAAGCTTGAAGTTCTTGGCAATGGGACAACTCTTAGAAGTGCACAAAAAGTTAAGGGGTAAAGTGGTTCTAGTTCAGATTCTGAACCCTGCGAGAAGCAGAGGGAAAGACATTCAAGATGTTCAAAGCGAGACCAATTCTATAGCAAAAGAGATCAACGATAAATACGGCGAACGGGGGTACCAGCCAATCTTGTTCATCAATGGCCCTGTTTCGACGCAGGAGAAAGCCGCATACTACGCCATTTCTGAATGCTGCGTCGTGAATGCTGTGAGAGATGGTATGAATTTAGTGCCTTATACGTACACTGTTTGTAGACAGGGGATTGACAATAACGATTCCGCAAGCCCCAAACGAAGCGTTATTATAGTGTCTGAATTCATCGGGTGTTCTCCATCTCTGAGTGGAGCAATCAGAGTGAACCCATGGAACATCGACGATGTCTCAGAGGCGATGAATTCGGCTATTACGATGTTAGAGGCAGAGAAACAATTGCGTCATGAGAAGCATTACAAGTACATAAGTTCCCATGATGTGGCCTACTGGGCTAAGAGTTTTGATCAGGATTTAGAGAGAGCTTGTAGAGAACATTACATGAAAAGGTGTTGGGCTGTTGGATTTGGCTTGGGGTTCAGAATTGTCGCTCTTGATCCTACCTTCAGGAAGCTTTCAGTGGAAGGCATTGTCTCTGCGTATAGGAGTACACAGAGCAGGTTGATCCTTTTGGACTATGATGGCACCATGATGCCTCAGAATGATGGCACCATGATGCCTCAGAACTCTGTTGATAAAGCCCCCAGCAACGAAGTTATTGCTGTCTTGGATTGCCTATGTAGCGACCCCAGAAACATAGTGTTCATTGTCAGTGGTAGAGACAGGACTTGCCTGAGCAAGTGGTTTTCTCCATGCGATAAGTTGGGCCTCTCAGCCGAGCATGGCTTCTTTACTAGATGGAGTAGGGAACTCCCTTGGGAAACCTGTGGGTTAACGACGGACTTTGATTGGATGAAGATTGCAGAGCCAGTGATGGCGCTCTATACAGAAGCAACTGATGGTTCTTTCATCGAGCAAAAGGAGAGTGCTCTGGTTTGGCACCACCAAGATGCCGACCCTCATTTCGGATCGTGCCAAGCGAAAGAGCTTCTCGATCACCTGGAGAGTGTTCTTGCTAATGAACCAGTAGTGGTCAAGAGAGGACAGCACATCGTTGAAGTGAAACCTCAGGGTGTGAGTAAAGGAATAGTTGTGGAAAATCTAATCTCAAGGATGATAAGTATGGGGAGGGCACCAGATTTTCTCCTGTGCATAGGAGATGATCGGTCAGACGAAGATATGTTTGAGAGCATTGCTCGTTCAGTTTCTGATCCAACCCTCCCAACCATAGCACAAGTCTTTGCCTGCACTGTGGGCCAGAAGCCAAGCATGGCAAGATACTTTCTGGATGACACTACTGAAGTCATCAACTTGCTTGAAGGACTCTCCATCTCATTGTCACCACCACCACCACCACCACCACCGTCCATTCATTCTCAGGAACTTGAAGGATCGGAATAG | 2598 | 0.4773 | MLSRSCLDLLNLVSIDDYQTLSRIPKVMTVPGAIPEFQAHDDASSGSGTEAAVCSVPQERRIIVANQLPIRSRRDAETKKWSFELDTDSLALQLKDGFPSDVEVLYVGSLGADIDSSEQDEVSQILLDKFRCVPTFLPHEIQNKFYHGFCKHYLWPLFHYMLPMSPSHGARFDRAQWQAYVLANKIFADKVTEVINPDEDYVWVHDYHLMILPTLLRKRFHRVKLGFFLHSPFPSSEIYRTIPVRDDILRAMLNCDLLGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVTIKIQPVGIHMGQLESVLSLPQTGERIKELKKQYEGKIVILGVDDMDLFKGISLKFLAMGQLLEVHKKLRGKVVLVQILNPARSRGKDIQDVQSETNSIAKEINDKYGERGYQPILFINGPVSTQEKAAYYAISECCVVNAVRDGMNLVPYTYTVCRQGIDNNDSASPKRSVIIVSEFIGCSPSLSGAIRVNPWNIDDVSEAMNSAITMLEAEKQLRHEKHYKYISSHDVAYWAKSFDQDLERACREHYMKRCWAVGFGLGFRIVALDPTFRKLSVEGIVSAYRSTQSRLILLDYDGTMMPQNDGTMMPQNSVDKAPSNEVIAVLDCLCSDPRNIVFIVSGRDRTCLSKWFSPCDKLGLSAEHGFFTRWSRELPWETCGLTTDFDWMKIAEPVMALYTEATDGSFIEQKESALVWHHQDADPHFGSCQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGIVVENLISRMISMGRAPDFLLCIGDDRSDEDMFESIARSVSDPTLPTIAQVFACTVGQKPSMARYFLDDTTEVINLLEGLSISLSPPPPPPPPSIHSQELEGSE | 865 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa02g0235 | 865 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 26 | 841 | IPR001830 | GO:0003824|GO:0005992 | |
| Bisa02g0235 | 865 | FunFam | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 723 | 849 | - | - | |
| Bisa02g0235 | 865 | Gene3D | Glycogen Phosphorylase B; | 53 | 312 | - | - | |
| Bisa02g0235 | 865 | Gene3D | - | 723 | 846 | IPR023214 | - | |
| Bisa02g0235 | 865 | Gene3D | - | 585 | 709 | IPR023214 | - | |
| Bisa02g0235 | 865 | Gene3D | Glycogen Phosphorylase B; | 313 | 523 | - | - | |
| Bisa02g0235 | 865 | FunFam | Alpha,alpha-trehalose-phosphate synthase | 314 | 523 | - | - | |
| Bisa02g0235 | 865 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 585 | 710 | - | - | |
| Bisa02g0235 | 865 | Pfam | Glycosyltransferase family 20 | 60 | 539 | IPR001830 | GO:0003824|GO:0005992 | |
| Bisa02g0235 | 865 | SUPERFAMILY | HAD-like | 586 | 840 | IPR036412 | - | |
| Bisa02g0235 | 865 | MobiDBLite | consensus disorder prediction | 843 | 865 | - | - | |
| Bisa02g0235 | 865 | NCBIfam | HAD-IIB family hydrolase | 587 | 799 | IPR006379 | - | |
| Bisa02g0235 | 865 | CDD | HAD_TPP | 587 | 836 | - | - | |
| Bisa02g0235 | 865 | NCBIfam | trehalose-phosphatase | 585 | 840 | IPR003337 | GO:0003824|GO:0005992 | |
| Bisa02g0235 | 865 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 60 | 543 | - | - | |
| Bisa02g0235 | 865 | CDD | GT20_TPS | 60 | 539 | IPR001830 | GO:0003824|GO:0005992 | |
| Bisa02g0235 | 865 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 53 | 312 | - | - | |
| Bisa02g0235 | 865 | Pfam | Trehalose-phosphatase | 589 | 831 | IPR003337 | GO:0003824|GO:0005992 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa02g0235 | Bisa-ChrBisa02 | 4259557 | 4262556 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa02g0235 | 1 | 859 | Trehalose Biosynthesis Gene Families | AT1G23870 | 63.835 | 0.0 | 1178 |