Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0228 ATGCAGCATGCTGATGATTCATATGTAGACTCCGTATATAAAGCTCAGTTTGTGGCAGGTGCTGATACAAATCCCCTACTGGGAGGGAAGAAGTTGATAATTGGTGTGCCTAAGAAATCTGGTTTTACCCAATTCCTGGATGCACAACTCACTTCTGCCAATAAGACCCAATTATACGATGCCGTGGTGGGAGATGTGTCGATTGTGGCAAACCGATCGAATTACGTAGATTTTACACTGCCATATACGGAGTCTGGCGTGAAGATGCTTGTAAAAGTTGGACATGATGAACGCTTGAATATGTGGATTTTTGTACGACCTTTTAGTTGGGATCTTTGGTTGTGCGTCTTTGTTATCTGTATATTCATAGGAGGAACTATACGGTTCATGGAACGTAATGTAAAGGAAGATGCAGGACTCGAAAATTCGACACGTAGGGAACAACTTACCAGGGTTTCAGTCTTGTGGCTTCCTTTGGCACAAGCAGTTCTTGCAGAAGGAGAATCAGTTGCCAAGAATTGCTCTAGGTTTGTGTTGGTGATGTGGTTGATATTAGCATTTGTGCTCATGCAAAGCTACACAGCATGCTTGTCCTCAATATTAACAGTAAATCAGTTACAACCTAGTTACCCTAATGTAAATCAACTAAGGACAGACCTTAAAATTAATATTGGATACCAACGTGGTTCCTTTGTACGAGATTTATTGGTGGACCCGAACCGCTTGAACTTTGCTGAATCAAGGCTTAAGGAGTACTCCACCATTGAAGAATATCGAGAAGCTTTAGACAGAGGAAGCCGCAATGGTGGTGTTGATGCTATTTTTGATGAAGTTCCCTTCATTAAGGTCTTCCTTAAGGAGTATCGTTCCAATTATGTGATGGTTGGACCTAGGAACCGCAACGATGGACTGGGTTTTGCATTTCCTAAAAACTCCAACTTAACGTCGTACTTTTCTAGAGCCGTATTAAATGTAACTGAGGGTGCAGAAATGGACCTGATTGAGCACAAATATTTTGGAAGCAGTGAGGATGAAGTCCAAGACCAATCTAATTCGTCGTCAGATGCCAGTCCCAGCCTCGCTGCGTATAGCTTTGCAGGTCTGTTCATGGTGATTGGAGTTCTTGTATTGTTAGCTTTGCTAGTCTCTGAAAGTCATATATGGCGGAAACCTGTGATGCTGGCAAAAACTTATAGCCAAAAAATCTTGACTCGGACTTCTACAAAAAACAACCAATCAGAAGACGGTTCTACAACAGGAGAAAATGTTGACGAAGGTTCGACAGCCAGAAGAAATAGTGGCTCAGCAAATGAAGAACATAACCATCCAAAATTCCCTTCGAGATCACCTTCCAACATAGATATCGAAGCATTGGCTTAA 1380 0.4196 MQHADDSYVDSVYKAQFVAGADTNPLLGGKKLIIGVPKKSGFTQFLDAQLTSANKTQLYDAVVGDVSIVANRSNYVDFTLPYTESGVKMLVKVGHDERLNMWIFVRPFSWDLWLCVFVICIFIGGTIRFMERNVKEDAGLENSTRREQLTRVSVLWLPLAQAVLAEGESVAKNCSRFVLVMWLILAFVLMQSYTACLSSILTVNQLQPSYPNVNQLRTDLKINIGYQRGSFVRDLLVDPNRLNFAESRLKEYSTIEEYREALDRGSRNGGVDAIFDEVPFIKVFLKEYRSNYVMVGPRNRNDGLGFAFPKNSNLTSYFSRAVLNVTEGAEMDLIEHKYFGSSEDEVQDQSNSSSDASPSLAAYSFAGLFMVIGVLVLLALLVSESHIWRKPVMLAKTYSQKILTRTSTKNNQSEDGSTTGENVDEGSTARRNSGSANEEHNHPKFPSRSPSNIDIEALA 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0228 459 SMART GluR_14 31 341 IPR001320 GO:0015276|GO:0016020
Bisa02g0228 459 Pfam Bacterial extracellular solute-binding proteins, family 3 50 340 IPR001638 -
Bisa02g0228 459 Gene3D - 34 101 - -
Bisa02g0228 459 MobiDBLite consensus disorder prediction 406 434 - -
Bisa02g0228 459 SUPERFAMILY Periplasmic binding protein-like II 27 341 - -
Bisa02g0228 459 Gene3D - 102 235 - -
Bisa02g0228 459 MobiDBLite consensus disorder prediction 406 459 - -
Bisa02g0228 459 Pfam Ligand-gated ion channel 341 374 IPR001320 GO:0015276|GO:0016020
Bisa02g0228 459 Gene3D - 236 344 - -
Bisa02g0228 459 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 55 408 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0228 Bisa-ChrBisa02 4081377 4085310 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0228 29 382 Ion Channels AT2G29120 37.871 6.92e-69 234