Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0216 ATGGGATCCACCCTCAGTTGCTGCACTTCAGAGAAGATCGAAGAAGCTGCGGCGACGACATCATTGGGTGGTGTAGTTAAGAACTCGTGGAGAATATTCACATACAAGGAGCTGCATTCAGCCACCAACGGTTTCAGTGAGGACAACAAACTCGGTGAAGGTGGATTTGGAAGTGTCTATTGGGGAAAAACCACTGATGATCTCCAGATCGCAGTGAAGAAACTGAAAGCAACGACCTCAAAGGCAGAGATGGAATTTGCAGTGGAAGTAGAAGTTCTGGGAAGGGTTGGTCACAAGAACTTGCTGGGACTCAAAGGGTATTGTGCAGAAGGGGGTGATCAACGCCTCATAGTCTATGATTACATACCAAATCTCAGTCTTCTCTCTCATCTTCATGGCCAGTTTGCATGTGAAGTCCATCTCCACTGGAAAAGAAGATTCAACATTGCCATTGCCTCCGCTGAAGGCTTACAATACTTGCACCATGAGGTCACGCCCCATATAATTCATAGGGACATCAAGGCCAGCAATGTGCTTTTGAACTCAGATTTCGAACCTCTAGTCGCTGATTTTGGGTTCGCAAAGCTAATTCCAGAAGGAGTTAGTCACATGACTACTCGTGTTAGGGGCACTTTGGGGTATTTGGCACCTGAATATGCTATGTGGGGGAAAGTCTCTGAGAGCTGCGACGTTTTCAGCTTTGGAATTCTTTTGCTAGAGCTGGTATCTGGAAGAAAGCCCATAGAGAAGCTTCCTGGTGGGCTTAGGAGGACCATAACTGAATGGGCTGACCCACTCATAACCCAAGGTAGGTTTAGGGATTTGGTGGACCCAAGGCTTAGAGGGAACTTTGATGTGAATCAAGTGAAGCAGGTCATCCATGTGGCTGCTCTTTGCGTTCAAAGCGAACCTCAGGAACGACCTAACATGAAGCAAGTGGTTAGTTTTTTGAAAGGATGGGAACCTCAGGCCAGGGTGATGAAGATGATCAGGATAGATAGTGTCAAGTATAGCGATGAATTGTTAGCACTTGATCAGACTAGTGATGATGATGATGATGATGATATTGATGATGGTGGTGGCGATGGTTATGGTGTTTTCAGTGCTCTAGATGTGCAAAAAATGCATCATCCTTACAAGAAGAAATTAAATGACTACTAA 1161 0.4548 MGSTLSCCTSEKIEEAAATTSLGGVVKNSWRIFTYKELHSATNGFSEDNKLGEGGFGSVYWGKTTDDLQIAVKKLKATTSKAEMEFAVEVEVLGRVGHKNLLGLKGYCAEGGDQRLIVYDYIPNLSLLSHLHGQFACEVHLHWKRRFNIAIASAEGLQYLHHEVTPHIIHRDIKASNVLLNSDFEPLVADFGFAKLIPEGVSHMTTRVRGTLGYLAPEYAMWGKVSESCDVFSFGILLLELVSGRKPIEKLPGGLRRTITEWADPLITQGRFRDLVDPRLRGNFDVNQVKQVIHVAALCVQSEPQERPNMKQVVSFLKGWEPQARVMKMIRIDSVKYSDELLALDQTSDDDDDDDIDDGGGDGYGVFSALDVQKMHHPYKKKLNDY 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0216 386 CDD STKc_IRAK 51 319 - -
Bisa02g0216 386 PANTHER OS01G0253100 PROTEIN 27 323 - -
Bisa02g0216 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Bisa02g0216 386 ProSitePatterns Protein kinases ATP-binding region signature. 51 74 IPR017441 GO:0005524
Bisa02g0216 386 FunFam PTI1-like tyrosine-protein kinase At3g15890 122 335 - -
Bisa02g0216 386 ProSiteProfiles Protein kinase domain profile. 45 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0216 386 SMART serkin_6 45 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0216 386 Gene3D Phosphorylase Kinase; domain 1 17 121 - -
Bisa02g0216 386 Gene3D Transferase(Phosphotransferase) domain 1 122 339 - -
Bisa02g0216 386 FunFam PTI1-like tyrosine-protein kinase At3g15890 17 121 - -
Bisa02g0216 386 SUPERFAMILY Protein kinase-like (PK-like) 29 330 IPR011009 -
Bisa02g0216 386 Pfam Protein tyrosine and serine/threonine kinase 48 317 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0216 Bisa-ChrBisa02 3323003 3325536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0216 33 317 Trihelix Transcription Factor Family AT1G70460 49.481 1.57e-87 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Bisa02g0216 PK_Tyr_Ser-Thr 4.7e-42 CL0016