Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0215 ATGGGAATCGAGAGAGGAAACCTCCGCGGCTTTCGAAGCGGCGGCTGGAGCGTGCCGCCGAAGCCGTGCGACTCCTGCAAATCGGCGGCGTCGGCAGTTTTCTGCCGAGCCGACTCGGCTTTCCTGTGTATGCTCTGTGACAACAAAATTCACTGCGCCAATAAGCTGGCGTTGCGGCACGAGCGCGTGTGGATGTGCGAGGTGTGCGAGCAAGCCCCTGCCTCCGTCACGTGCAAGGCCGACGCTGCCGCCCTATGCTTCACGTGCGATTCGGATATCCACTCCGCCAATCCCCTCGCTCGCCGCCACGAGCGTGTCCCCGTGGAGCCTTTCTTTGACTCTGCTGAATCTGTTGCGAAATCCGCTGCTGCTGCTTTCAACTTGCTAGTTCCAACCGATAATGGAATTGGTTCCGATGGATTCCCTCACGACGAATCCGAATCAGCGTGGCTATTTCCGAATCCCAATCCCACTCCGAATTTCAACGCCAAGATCATGGATGCTCCGGATATCAAAACAGGGGATGTGTTCTTCCCGGAAATGGAATATCCTTTCCGGGATTGCGATTACTCAAACTCCTTTGATCAGAATAACAATAATTGCGCTGCTAATAACGATAGCGTAGTCCCTGTTCAAAGCAATCCCGATCAAGCTCCGTTGATGAAACATATGGAGAGTTGCTTCGATATCAACTTTTGCAGATCGAAGCTCTCTTCGTTTGGCTACCCAACACAGTCGTTTAGTCGTCAAAGCGTATCATCGTCCTCGCTTGACGTTGGAGTTGTCCAGGACGGAGGTAATAGTACAGTGTCAGACATGTCGTTCCCACTGGGCCGGAACGTAAGCTACAGTTCTGAATCGAGCGGAATGGTCTCAGCGGGTAATAACCAATCGGGGAGTTCGTTGTCTGGTATGAACCGGGAAGCTCGGGTGTTGAGGTACAGGGAGAAGAGGAAGAACCGGAAATTTGAGAAAACCATACGCTACGCTTCGCGAAAGGCGTACGCGGAAACCCGGCCCAGGATCAAAGGCCGGTTCGCCAAACGGACGGAAATCGACTCCGATTTGGACCAGCTCTTTAGCCCCGCCCCCACTTCAGATCTTTTCCTGGATACTCAGTACGGCGTCGTCCCTTCGTTTTAA 1143 0.5346 MGIERGNLRGFRSGGWSVPPKPCDSCKSAASAVFCRADSAFLCMLCDNKIHCANKLALRHERVWMCEVCEQAPASVTCKADAAALCFTCDSDIHSANPLARRHERVPVEPFFDSAESVAKSAAAAFNLLVPTDNGIGSDGFPHDESESAWLFPNPNPTPNFNAKIMDAPDIKTGDVFFPEMEYPFRDCDYSNSFDQNNNNCAANNDSVVPVQSNPDQAPLMKHMESCFDINFCRSKLSSFGYPTQSFSRQSVSSSSLDVGVVQDGGNSTVSDMSFPLGRNVSYSSESSGMVSAGNNQSGSSLSGMNREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEIDSDLDQLFSPAPTSDLFLDTQYGVVPSF 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0215 380 SMART bboxneu5 18 65 IPR000315 GO:0008270
Bisa02g0215 380 SMART bboxneu5 66 108 IPR000315 GO:0008270
Bisa02g0215 380 MobiDBLite consensus disorder prediction 286 305 - -
Bisa02g0215 380 Pfam CCT motif 307 349 IPR010402 GO:0005515
Bisa02g0215 380 CDD Bbox1_BBX-like 66 108 - -
Bisa02g0215 380 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 22 363 IPR045281 GO:0009909
Bisa02g0215 380 CDD Bbox1_BBX-like 22 65 - -
Bisa02g0215 380 ProSiteProfiles Zinc finger B-box type profile. 61 108 IPR000315 GO:0008270
Bisa02g0215 380 ProSiteProfiles Zinc finger B-box type profile. 18 65 IPR000315 GO:0008270
Bisa02g0215 380 Pfam B-box zinc finger 63 108 IPR000315 GO:0008270
Bisa02g0215 380 MobiDBLite consensus disorder prediction 286 308 - -
Bisa02g0215 380 ProSiteProfiles CCT domain profile. 307 349 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0215 Bisa-ChrBisa02 3305991 3307234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0215 1 380 C2C2-CO-like Transcription Factor Family AT5G57660 50.386 7.19e-108 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bisa02g0215 zf-B_box 1.7e-06 No_clan